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The map label for this gene is ybhS [H]

Identifier: 209550578

GI number: 209550578

Start: 3067280

End: 3068407

Strand: Direct

Name: ybhS [H]

Synonym: Rleg2_3002

Alternate gene names: 209550578

Gene position: 3067280-3068407 (Clockwise)

Preceding gene: 209550577

Following gene: 209550579

Centisome position: 67.59

GC content: 63.83

Gene sequence:

>1128_bases
ATGAGCGCCTCTTCCGGCCGACGTCAGCGTCTTTTTGCCCTCGTGCGCAAGGAAAGCTTCCAGGCGATCCGCGATCCGAG
CAGTATCCTCATTGCTTTCGTGCTGCCGCTGATCCTGCTCTTTCTCTTCGGCTACGGCGTCTCGCTCGATACCACCCGCA
CCCGCATCGGCCTCGTGACCGAGGAGCTGACGCCGCTGACACAGGACCTGTCGGCCAGTTTCCAGGCCTCACGCTATTTC
GATGTTGCAATGGGCCGCGACCGGCGACTGTTCGAGGAAGACCTCGTGCTCGGCAAGGTGCGCGGCATCGTCGTCATCCC
GGCCGATTTCACCACGCGTTACACCGCAGGCAACCGCCCGGCCATCCAGGTGATCGTCGACGGTTCCGACCCGAACACCG
CCAATTTCGTCCAGAATTACGCCCAGGGCGCCGTCGCCAACTGGGAACAGCAGCGGCAGGCCGACGTCGCCTCCCGCAGT
CCCGCCATCGCGGTCGAGCAGCGCTTCTGGTTCAATCCGGAGCTCACCAGCCGCAATTTTCTCGTGCCCGGCTCGATCGC
CATCGTCATGACGCTGGTCGGCACGCTGCTGACCTCGCTCGTCGTCGCCCGCGAATGGGAGCGCGGCACCATGGAGGCGA
TGATGGCGACGCCGGTGACGGCGGTCGAACTGCTCACCGGCAAGATCCTGCCTTATTTCCTGCTCGGCCTCACCTCGATG
ACCCTCTGCGTCCTGCTGGCCGTCTTCCTGTTTGGCGTGCCGTTCCGCGGCTCGGTCGCCGCCCTTTACGCGCTTTCGGC
CGCCTTCCTGATCCCGGCGCTGGGGCAAGGCCTGTTGATTTCGACCGCAACGAAGAATCAGTTCCTTGCGTCGCAGCTGG
CACTGATCTCCGCCTTTCTGCCGGCCTTCCTGCTCTCGGGCTTCCTGTTCGAGATCAACTCGATGCCCCCTGTCATCCAG
TGGATCACCTTCATTGTGCCGGCGCGCTACCTGATACCCAGCCTGCAGACGGTCTTTCTCGCCGGCGACATCTGGCCGAT
GTTCGCAAAGGCAATCGCCATCATGCTGGCGATCGGCGCCGTCATGTTCGTGCTTGCGGCCCGCAGCACCCGGAAGAGGA
TCGGCTGA

Upstream 100 bases:

>100_bases
ATGAATTGAAGGCCCGAGTGGCGACCAAGGAGCAGCCGGATCCGACGATGGAGGACGCCTTCATCGCCCTGGTGCAGCAA
TCGGAAGCGGAGGATGCCGC

Downstream 100 bases:

>100_bases
GATGGGATGGACAAGGCTCTACGCCCTCATCGTCAAGGAGCTGCTCGCCGTGCTGCGCGACCCCAAGGGCCGCGCCATCC
TGATCGGCCCGCCGATCGTC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSASSGRRQRLFALVRKESFQAIRDPSSILIAFVLPLILLFLFGYGVSLDTTRTRIGLVTEELTPLTQDLSASFQASRYF
DVAMGRDRRLFEEDLVLGKVRGIVVIPADFTTRYTAGNRPAIQVIVDGSDPNTANFVQNYAQGAVANWEQQRQADVASRS
PAIAVEQRFWFNPELTSRNFLVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTAVELLTGKILPYFLLGLTSM
TLCVLLAVFLFGVPFRGSVAALYALSAAFLIPALGQGLLISTATKNQFLASQLALISAFLPAFLLSGFLFEINSMPPVIQ
WITFIVPARYLIPSLQTVFLAGDIWPMFAKAIAIMLAIGAVMFVLAARSTRKRIG

Sequences:

>Translated_375_residues
MSASSGRRQRLFALVRKESFQAIRDPSSILIAFVLPLILLFLFGYGVSLDTTRTRIGLVTEELTPLTQDLSASFQASRYF
DVAMGRDRRLFEEDLVLGKVRGIVVIPADFTTRYTAGNRPAIQVIVDGSDPNTANFVQNYAQGAVANWEQQRQADVASRS
PAIAVEQRFWFNPELTSRNFLVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTAVELLTGKILPYFLLGLTSM
TLCVLLAVFLFGVPFRGSVAALYALSAAFLIPALGQGLLISTATKNQFLASQLALISAFLPAFLLSGFLFEINSMPPVIQ
WITFIVPARYLIPSLQTVFLAGDIWPMFAKAIAIMLAIGAVMFVLAARSTRKRIG
>Mature_374_residues
SASSGRRQRLFALVRKESFQAIRDPSSILIAFVLPLILLFLFGYGVSLDTTRTRIGLVTEELTPLTQDLSASFQASRYFD
VAMGRDRRLFEEDLVLGKVRGIVVIPADFTTRYTAGNRPAIQVIVDGSDPNTANFVQNYAQGAVANWEQQRQADVASRSP
AIAVEQRFWFNPELTSRNFLVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTAVELLTGKILPYFLLGLTSMT
LCVLLAVFLFGVPFRGSVAALYALSAAFLIPALGQGLLISTATKNQFLASQLALISAFLPAFLLSGFLFEINSMPPVIQW
ITFIVPARYLIPSLQTVFLAGDIWPMFAKAIAIMLAIGAVMFVLAARSTRKRIG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=373, Percent_Identity=48.7935656836461, Blast_Score=361, Evalue=1e-101,
Organism=Escherichia coli, GI48994943, Length=367, Percent_Identity=31.0626702997275, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1787010, Length=353, Percent_Identity=28.6118980169972, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI226510979, Length=290, Percent_Identity=29.3103448275862, Blast_Score=83, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24650855, Length=381, Percent_Identity=22.8346456692913, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24650853, Length=381, Percent_Identity=22.8346456692913, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41057; Mature: 40926

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASSGRRQRLFALVRKESFQAIRDPSSILIAFVLPLILLFLFGYGVSLDTTRTRIGLVT
CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EELTPLTQDLSASFQASRYFDVAMGRDRRLFEEDLVLGKVRGIVVIPADFTTRYTAGNRP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCEEECCCCCC
AIQVIVDGSDPNTANFVQNYAQGAVANWEQQRQADVASRSPAIAVEQRFWFNPELTSRNF
EEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCE
LVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTAVELLTGKILPYFLLGLTSM
ECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TLCVLLAVFLFGVPFRGSVAALYALSAAFLIPALGQGLLISTATKNQFLASQLALISAFL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
PAFLLSGFLFEINSMPPVIQWITFIVPARYLIPSLQTVFLAGDIWPMFAKAIAIMLAIGA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VMFVLAARSTRKRIG
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SASSGRRQRLFALVRKESFQAIRDPSSILIAFVLPLILLFLFGYGVSLDTTRTRIGLVT
CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EELTPLTQDLSASFQASRYFDVAMGRDRRLFEEDLVLGKVRGIVVIPADFTTRYTAGNRP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCEEECCCCCC
AIQVIVDGSDPNTANFVQNYAQGAVANWEQQRQADVASRSPAIAVEQRFWFNPELTSRNF
EEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCE
LVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVTAVELLTGKILPYFLLGLTSM
ECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TLCVLLAVFLFGVPFRGSVAALYALSAAFLIPALGQGLLISTATKNQFLASQLALISAFL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
PAFLLSGFLFEINSMPPVIQWITFIVPARYLIPSLQTVFLAGDIWPMFAKAIAIMLAIGA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VMFVLAARSTRKRIG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]