Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is ybhG [C]
Identifier: 209550576
GI number: 209550576
Start: 3064516
End: 3065529
Strand: Direct
Name: ybhG [C]
Synonym: Rleg2_3000
Alternate gene names: 209550576
Gene position: 3064516-3065529 (Clockwise)
Preceding gene: 209550575
Following gene: 209550577
Centisome position: 67.53
GC content: 66.96
Gene sequence:
>1014_bases ATGAAACGCCTCGTCCCCCTCACCTTCCTTCTCCTCGTTGCGGCAGGCGCCGCCGCCTGGTGGTACGGCCTGCCTGAAAA GCTCGGCTGGTTGCCCGAGGCCCGCCGCGAATTCGTCCTTTACGGCAATGTCGATATCCGCCAGGTGTCGCTCGGCTTCC GTGTCAGCGGCCGCCTCTCCGAACTCGGCGTCGACGAAGGCGATGTCGTCAAGAGCGGAACGGTGCTGGCAAAGCTCGAT GCCGCGCCCTATGAATTCGCCGTCCGTTCGGGCGAGGCCAACGCCGCGGCCCTTCGGGCAACGCTCGACAAGCTGAAGGC TGGCCCCCGCCCGACCGAGATCGCCCAGGCGCGCGCCGCCTATGACGAAAGCCTCGCCGATCTCGAAAATGCCAACCTCG CCTATGACCGAGCCCGCCAGCTTCGTCCGCAGGGCACGATTTCCGAAGCGACGCTCGACCAGGCGACCGCGGCAAGAGCG ATGGCCGCCGCCCGCTCCGAGTCCGCCAACGAGGCGCTGAAGCTGCTGCAGGAGGGTTCGCGCATCGAGGATATCGCCGC CGCCGATGCGCAGGTGAAGGCAGCGGAGGCAACGCTCGCCTCGGCCCGCACCTCGCTTGCCGATACCGAGCTGCGCGCAC CGAACGACGGCGTCATCCTCTCGCGTGTGCGGGAGAACGGCGCCATCGTCTCGCCGGCCGATACCGTCTTCGTGCTCTCC CTGACCGAGCCCGTCTCGGTGCGCAGCTATGTCGCCGAGCCCGATCTCGGCCGCATCCACCCCGGCATGAAGGTGTCCGT CGCCTCCGATACGGCACCCAACAAGCCCTATGAAGGCACGATCGGTTTCATCTCGCCGGTCGCCGAATTCACCCCGAAAT CGGTGGAGACGCCGGAGCTCAGGACCGATCTCGTCTATCGCCTGAGGATCGTCATCGACAAACCCGGCGCGGATCTGCGC CAGGGCATGCCGGTCACCGTGCGCCTTCCCCATCCTCAGGCAGACGGACGATGA
Upstream 100 bases:
>100_bases TGGAATGGGACGCCGTCGGCCCGAAACAGGTGGACACCTTGCGCGGCCTCGCCGCCGAACTGGTCGATATGCTCGGCCCG TCGACGAAGGGAGGCGCGGC
Downstream 100 bases:
>100_bases CCGCCGCCGAGACCGCCCCCCAGGCAGAGCGGGACGATAGGCCGCTCGTCCGCATCGACGGCGTCACCAAACGTTTCGGC GATGCGCCTGCAGCCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKRLVPLTFLLLVAAGAAAWWYGLPEKLGWLPEARREFVLYGNVDIRQVSLGFRVSGRLSELGVDEGDVVKSGTVLAKLD AAPYEFAVRSGEANAAALRATLDKLKAGPRPTEIAQARAAYDESLADLENANLAYDRARQLRPQGTISEATLDQATAARA MAAARSESANEALKLLQEGSRIEDIAAADAQVKAAEATLASARTSLADTELRAPNDGVILSRVRENGAIVSPADTVFVLS LTEPVSVRSYVAEPDLGRIHPGMKVSVASDTAPNKPYEGTIGFISPVAEFTPKSVETPELRTDLVYRLRIVIDKPGADLR QGMPVTVRLPHPQADGR
Sequences:
>Translated_337_residues MKRLVPLTFLLLVAAGAAAWWYGLPEKLGWLPEARREFVLYGNVDIRQVSLGFRVSGRLSELGVDEGDVVKSGTVLAKLD AAPYEFAVRSGEANAAALRATLDKLKAGPRPTEIAQARAAYDESLADLENANLAYDRARQLRPQGTISEATLDQATAARA MAAARSESANEALKLLQEGSRIEDIAAADAQVKAAEATLASARTSLADTELRAPNDGVILSRVRENGAIVSPADTVFVLS LTEPVSVRSYVAEPDLGRIHPGMKVSVASDTAPNKPYEGTIGFISPVAEFTPKSVETPELRTDLVYRLRIVIDKPGADLR QGMPVTVRLPHPQADGR >Mature_337_residues MKRLVPLTFLLLVAAGAAAWWYGLPEKLGWLPEARREFVLYGNVDIRQVSLGFRVSGRLSELGVDEGDVVKSGTVLAKLD AAPYEFAVRSGEANAAALRATLDKLKAGPRPTEIAQARAAYDESLADLENANLAYDRARQLRPQGTISEATLDQATAARA MAAARSESANEALKLLQEGSRIEDIAAADAQVKAAEATLASARTSLADTELRAPNDGVILSRVRENGAIVSPADTVFVLS LTEPVSVRSYVAEPDLGRIHPGMKVSVASDTAPNKPYEGTIGFISPVAEFTPKSVETPELRTDLVYRLRIVIDKPGADLR QGMPVTVRLPHPQADGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=310, Percent_Identity=47.4193548387097, Blast_Score=248, Evalue=5e-67, Organism=Escherichia coli, GI1789900, Length=313, Percent_Identity=29.3929712460064, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI87081796, Length=332, Percent_Identity=26.8072289156627, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI87081951, Length=279, Percent_Identity=27.2401433691756, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788711, Length=269, Percent_Identity=26.3940520446097, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1790519, Length=242, Percent_Identity=28.9256198347107, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 36120; Mature: 36120
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLVPLTFLLLVAAGAAAWWYGLPEKLGWLPEARREFVLYGNVDIRQVSLGFRVSGRLS CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCEEEEEEECEEECCCHH ELGVDEGDVVKSGTVLAKLDAAPYEFAVRSGEANAAALRATLDKLKAGPRPTEIAQARAA HCCCCCCCEEECCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH YDESLADLENANLAYDRARQLRPQGTISEATLDQATAARAMAAARSESANEALKLLQEGS HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC RIEDIAAADAQVKAAEATLASARTSLADTELRAPNDGVILSRVRENGAIVSPADTVFVLS CHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCCEEEEEE LTEPVSVRSYVAEPDLGRIHPGMKVSVASDTAPNKPYEGTIGFISPVAEFTPKSVETPEL ECCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHH RTDLVYRLRIVIDKPGADLRQGMPVTVRLPHPQADGR HHHHEEEEEEEEECCCCHHHCCCCEEEECCCCCCCCC >Mature Secondary Structure MKRLVPLTFLLLVAAGAAAWWYGLPEKLGWLPEARREFVLYGNVDIRQVSLGFRVSGRLS CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCEEEEEEECEEECCCHH ELGVDEGDVVKSGTVLAKLDAAPYEFAVRSGEANAAALRATLDKLKAGPRPTEIAQARAA HCCCCCCCEEECCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH YDESLADLENANLAYDRARQLRPQGTISEATLDQATAARAMAAARSESANEALKLLQEGS HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC RIEDIAAADAQVKAAEATLASARTSLADTELRAPNDGVILSRVRENGAIVSPADTVFVLS CHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCCEEEEEE LTEPVSVRSYVAEPDLGRIHPGMKVSVASDTAPNKPYEGTIGFISPVAEFTPKSVETPEL ECCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHH RTDLVYRLRIVIDKPGADLRQGMPVTVRLPHPQADGR HHHHEEEEEEEEECCCCHHHCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]