Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is noeJ [H]
Identifier: 209550570
GI number: 209550570
Start: 3058498
End: 3059925
Strand: Direct
Name: noeJ [H]
Synonym: Rleg2_2994
Alternate gene names: 209550570
Gene position: 3058498-3059925 (Clockwise)
Preceding gene: 209550569
Following gene: 209550571
Centisome position: 67.4
GC content: 60.36
Gene sequence:
>1428_bases ATGACGCAGAAAATCGTTCCCGTGATCATGGCCGGCGGCAAAGGCACGCGGCTCTGGCCGCTTTCCCGTGCCACCGCACC GAAGCAGTTCATCCAGTTCGTCGGCAACAAGACGCTGTTTCAGGAGACGCTCGAACGCGTTTCCAACCCGGAGCTCTATG AAGCCCCGATCATCGTCACCAATGAGGAATTTCGCTTCCTGGTCGCCGAGCAGGCCCGCACTCTGGGCGTCCCGCTCGCC GCGGTGCTGCTTGAGCCGGTCGCCCGCAACACCGCCGCAGCGGTGGCCGCCGCCGCTACCCTTGCCGCCGAGCTTTTCGG CAAGAACACCATCATCCAGATGCTCGCCTCGGATCACGAGATCCTCGCCGACAAGAGCTATTTCGATTGCATCCGCATCG CCCGGAATGCTGCAGCCGACGGCAAGCTCGTTACTTTCGGCATCAGCCCCACCGAGCCGGCAACCGGCTACGGCTATATC GAAATCGGCGATGCGCTTGAAAACGGCGCCCACAAGGTCAGCTGTTTCGTGGAAAAACCGGCATTGGAGAAGGCCGAGCA GATGCTTGCCGACGGCGGCTTCTATTGGAACTCCGGCATCTTCATGTTCCCGGTGGAGGAACTCATTGCCGAGCTGCAGG AATATGCACCCGACGTGCTGAAGGCGGCGAGCAAAGCCGTTTCCAAGGCAAGCCGCGACCTCGACTTTACCCGCCTCGAC GCCGACCATTTCGCCAAGAGCCCCGATATCTCGATCGACTATGCGATCATGGAAAAGACCTCCAAGGCCGCTGTCGTCCC CTCGCCGTTCAAATGGTCCGACATGGGAAGCTGGGATGCCGTTTGGAAATCAGGCGTGCGTGACGACAACGGCAATGTCG CCGCCGCAAACACCACCGTCGTCAACACACGCAATTCGCTGGTCATGACCCACGGCGTGCATCTTGCCGTCCAAGGCATG GAGGATGTGGCCGTCATCGCCAGCGAGGACGCCGTCTATGTCGGACCGCTCAAAGACAGCCAGAATGTCGGGCAATTGGT CAAGATGCTGGCCTCCTCTTCCGCCACGGCGAAATTCACCGAAACCCATCCGACATCCTATCGTCCCTGGGGCGGCTATA CCTCGATCTTCAACGGCGATCGCTTCCAGGTGAAGCGTATCTTCGTGACGCCGGGCAAGAAGCTCTCGCTGCAGAAACAC CACCATCGCTCCGAACACTGGGTCGTCGTCAAGGGAACGGCCGAGGTGACGGTCGGCGAGACCGTGCGGATGCTGCGCGA AAACGAGAGCGTCTATATTCCGCTCGGCGAAGTCCATCGTCTCGCCAACCCTGGCAAGATCCTCCTCGAACTGATCGAGG TGCAGACGGGCTCCTATCTCGGCGAGGACGACATCATCCGTATCGTCGATGAGTTCGGAAGAACGTGA
Upstream 100 bases:
>100_bases GCCGCCCTGGATCTGCTGAAGACAGGGCTCACCCGAATAACGGACTGGGCAAACGCCCGCTAAACATGCCACGAACAAGC TTTTTTCAAGGAACCCGCCT
Downstream 100 bases:
>100_bases CGTCGCAGCCGAACCGCCTGGCCAGGCCCACACAATGCTTTTCCGGCGCGACCCGCCATCGCTGTTGAATTCGCTATCGG ACTTCTCGTAGAATGGACGC
Product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
Products: NA
Alternate protein names: GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MTQKIVPVIMAGGKGTRLWPLSRATAPKQFIQFVGNKTLFQETLERVSNPELYEAPIIVTNEEFRFLVAEQARTLGVPLA AVLLEPVARNTAAAVAAAATLAAELFGKNTIIQMLASDHEILADKSYFDCIRIARNAAADGKLVTFGISPTEPATGYGYI EIGDALENGAHKVSCFVEKPALEKAEQMLADGGFYWNSGIFMFPVEELIAELQEYAPDVLKAASKAVSKASRDLDFTRLD ADHFAKSPDISIDYAIMEKTSKAAVVPSPFKWSDMGSWDAVWKSGVRDDNGNVAAANTTVVNTRNSLVMTHGVHLAVQGM EDVAVIASEDAVYVGPLKDSQNVGQLVKMLASSSATAKFTETHPTSYRPWGGYTSIFNGDRFQVKRIFVTPGKKLSLQKH HHRSEHWVVVKGTAEVTVGETVRMLRENESVYIPLGEVHRLANPGKILLELIEVQTGSYLGEDDIIRIVDEFGRT
Sequences:
>Translated_475_residues MTQKIVPVIMAGGKGTRLWPLSRATAPKQFIQFVGNKTLFQETLERVSNPELYEAPIIVTNEEFRFLVAEQARTLGVPLA AVLLEPVARNTAAAVAAAATLAAELFGKNTIIQMLASDHEILADKSYFDCIRIARNAAADGKLVTFGISPTEPATGYGYI EIGDALENGAHKVSCFVEKPALEKAEQMLADGGFYWNSGIFMFPVEELIAELQEYAPDVLKAASKAVSKASRDLDFTRLD ADHFAKSPDISIDYAIMEKTSKAAVVPSPFKWSDMGSWDAVWKSGVRDDNGNVAAANTTVVNTRNSLVMTHGVHLAVQGM EDVAVIASEDAVYVGPLKDSQNVGQLVKMLASSSATAKFTETHPTSYRPWGGYTSIFNGDRFQVKRIFVTPGKKLSLQKH HHRSEHWVVVKGTAEVTVGETVRMLRENESVYIPLGEVHRLANPGKILLELIEVQTGSYLGEDDIIRIVDEFGRT >Mature_474_residues TQKIVPVIMAGGKGTRLWPLSRATAPKQFIQFVGNKTLFQETLERVSNPELYEAPIIVTNEEFRFLVAEQARTLGVPLAA VLLEPVARNTAAAVAAAATLAAELFGKNTIIQMLASDHEILADKSYFDCIRIARNAAADGKLVTFGISPTEPATGYGYIE IGDALENGAHKVSCFVEKPALEKAEQMLADGGFYWNSGIFMFPVEELIAELQEYAPDVLKAASKAVSKASRDLDFTRLDA DHFAKSPDISIDYAIMEKTSKAAVVPSPFKWSDMGSWDAVWKSGVRDDNGNVAAANTTVVNTRNSLVMTHGVHLAVQGME DVAVIASEDAVYVGPLKDSQNVGQLVKMLASSSATAKFTETHPTSYRPWGGYTSIFNGDRFQVKRIFVTPGKKLSLQKHH HRSEHWVVVKGTAEVTVGETVRMLRENESVYIPLGEVHRLANPGKILLELIEVQTGSYLGEDDIIRIVDEFGRT
Specific function: Involved In The Biosynthesis Of The Capsular Polysaccharide Colanic Acid. [C]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=476, Percent_Identity=45.1680672268908, Blast_Score=410, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 51931; Mature: 51800
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKIVPVIMAGGKGTRLWPLSRATAPKQFIQFVGNKTLFQETLERVSNPELYEAPIIVT CCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEECCEEEE NEEFRFLVAEQARTLGVPLAAVLLEPVARNTAAAVAAAATLAAELFGKNTIIQMLASDHE CCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH ILADKSYFDCIRIARNAAADGKLVTFGISPTEPATGYGYIEIGDALENGAHKVSCFVEKP HHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCEEEEEEEECH ALEKAEQMLADGGFYWNSGIFMFPVEELIAELQEYAPDVLKAASKAVSKASRDLDFTRLD HHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEC ADHFAKSPDISIDYAIMEKTSKAAVVPSPFKWSDMGSWDAVWKSGVRDDNGNVAAANTTV HHHHCCCCCCEEEEHEECCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECEEE VNTRNSLVMTHGVHLAVQGMEDVAVIASEDAVYVGPLKDSQNVGQLVKMLASSSATAKFT EECCCCEEEECCEEEEEECCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEE ETHPTSYRPWGGYTSIFNGDRFQVKRIFVTPGKKLSLQKHHHRSEHWVVVKGTAEVTVGE CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCEEEEECCCEEEHHH TVRMLRENESVYIPLGEVHRLANPGKILLELIEVQTGSYLGEDDIIRIVDEFGRT HHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TQKIVPVIMAGGKGTRLWPLSRATAPKQFIQFVGNKTLFQETLERVSNPELYEAPIIVT CCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEECCEEEE NEEFRFLVAEQARTLGVPLAAVLLEPVARNTAAAVAAAATLAAELFGKNTIIQMLASDHE CCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH ILADKSYFDCIRIARNAAADGKLVTFGISPTEPATGYGYIEIGDALENGAHKVSCFVEKP HHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCEEEEEEEECH ALEKAEQMLADGGFYWNSGIFMFPVEELIAELQEYAPDVLKAASKAVSKASRDLDFTRLD HHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEC ADHFAKSPDISIDYAIMEKTSKAAVVPSPFKWSDMGSWDAVWKSGVRDDNGNVAAANTTV HHHHCCCCCCEEEEHEECCCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECEEE VNTRNSLVMTHGVHLAVQGMEDVAVIASEDAVYVGPLKDSQNVGQLVKMLASSSATAKFT EECCCCEEEECCEEEEEECCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEE ETHPTSYRPWGGYTSIFNGDRFQVKRIFVTPGKKLSLQKHHHRSEHWVVVKGTAEVTVGE CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCEEEEECCCEEEHHH TVRMLRENESVYIPLGEVHRLANPGKILLELIEVQTGSYLGEDDIIRIVDEFGRT HHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]