Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
---|---|
Accession | NC_011369 |
Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209550521
Identifier: 209550521
GI number: 209550521
Start: 3000924
End: 3001904
Strand: Direct
Name: 209550521
Synonym: Rleg2_2944
Alternate gene names: NA
Gene position: 3000924-3001904 (Clockwise)
Preceding gene: 209550512
Following gene: 209550522
Centisome position: 66.13
GC content: 61.37
Gene sequence:
>981_bases ATGCTGATCCTTGTCACCGGGGCTACGGGCAAGGTCGGGCAGCGCTTCATTACTGGGCTGCTTGACGAGCCGCGATTTTC CAAAGCACGCATTCGCGCGCTTTGTCATAATCGTGTGCTCGAGGAAACCGACCGCATCAGTGTCGTCAAGGGCTCGATCG CCGACAGCGACGTCGTGGCCGCGGCGATGGACGGCGTCACCCATGTCGTGCATCTCGCCACCTGCAAGGAAATTCGGGCC GATGTGATGGATATCACCGTCAAGGGCCTGTTCTGGCTGCTCGAGGCGTTTCGCACCGGCCCCACGGCAAAACAGTTCAT CCTGATCGGCGGCGATGCCGGCATCGGGCATTTCTTCTATCGCCATGACGGGCCGGTGACCGAAAAGACGCCGCATCGCG CCTATCCCGGCTGCTACGCGCTCTCCAAGGTGCTGGAAGAGGTGATGCTCGAGCAGTTCGCCATCCAGTACGGCATCAAT ACCTGCTGCCTGCGGGCGCCCTGGATCATGGAGAAGGACGATTTCAAATATACGCTGTTCTTCGGCGACGATATCTTCGG CGGGCCGGACTGGAAGACGCTGGTGCCGGCGGCCGATGCCGAACGTTACGCGCAGGATGGCACCGTGCCGCTGCTGCGCG ATGCCGACGGGCGGCCGCTGAAGCGCAATTTCGTGCATGTCGACGATCTGGTCGCGGCGATCCTGGCGGCAATCGACAAT CCGCGCGCCAAAGGCGAGCTTTTCAACATCTCGATGGATCGGCCCGTCGACTATGGCGAGGTCGCGGCACACCTCGCCCG CACGCGCGGGCTCGGCTCGGTCGACATCGCAAGCCAGTTCCACTCGAACTGGATGGACAACAGCAAGGCCAGATATCTCT TGGACTGGAAGCCGGTCTACGATCTGGAAAAGCTGATCAATTCGGCTTGGGACTATCAGCGCTCGAAGGAGGAGCCTCGG GTCGTCTGGTATCCAGGTTGA
Upstream 100 bases:
>100_bases TCCGCTAAATCAGCCCCTCATCACAAAAATCTATTTTGTACGAGAAATACAGATTGACGCCGGAAACGCGTGCATATTAG CTGTTACTGGGGAGAGAGGT
Downstream 100 bases:
>100_bases TGACGCGGCGGGTGCAGAAGCGCCCGTCTTTTTCAATGGGAGGAAGCTATGAGGAAGGCATTATTGCTTACAGCTGCAGT TATGGCGCTGACGGCCGGTC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase; NDP-Sugar Oxidoreductase; UDP-Glucose 4-Epimerase
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MLILVTGATGKVGQRFITGLLDEPRFSKARIRALCHNRVLEETDRISVVKGSIADSDVVAAAMDGVTHVVHLATCKEIRA DVMDITVKGLFWLLEAFRTGPTAKQFILIGGDAGIGHFFYRHDGPVTEKTPHRAYPGCYALSKVLEEVMLEQFAIQYGIN TCCLRAPWIMEKDDFKYTLFFGDDIFGGPDWKTLVPAADAERYAQDGTVPLLRDADGRPLKRNFVHVDDLVAAILAAIDN PRAKGELFNISMDRPVDYGEVAAHLARTRGLGSVDIASQFHSNWMDNSKARYLLDWKPVYDLEKLINSAWDYQRSKEEPR VVWYPG
Sequences:
>Translated_326_residues MLILVTGATGKVGQRFITGLLDEPRFSKARIRALCHNRVLEETDRISVVKGSIADSDVVAAAMDGVTHVVHLATCKEIRA DVMDITVKGLFWLLEAFRTGPTAKQFILIGGDAGIGHFFYRHDGPVTEKTPHRAYPGCYALSKVLEEVMLEQFAIQYGIN TCCLRAPWIMEKDDFKYTLFFGDDIFGGPDWKTLVPAADAERYAQDGTVPLLRDADGRPLKRNFVHVDDLVAAILAAIDN PRAKGELFNISMDRPVDYGEVAAHLARTRGLGSVDIASQFHSNWMDNSKARYLLDWKPVYDLEKLINSAWDYQRSKEEPR VVWYPG >Mature_326_residues MLILVTGATGKVGQRFITGLLDEPRFSKARIRALCHNRVLEETDRISVVKGSIADSDVVAAAMDGVTHVVHLATCKEIRA DVMDITVKGLFWLLEAFRTGPTAKQFILIGGDAGIGHFFYRHDGPVTEKTPHRAYPGCYALSKVLEEVMLEQFAIQYGIN TCCLRAPWIMEKDDFKYTLFFGDDIFGGPDWKTLVPAADAERYAQDGTVPLLRDADGRPLKRNFVHVDDLVAAILAAIDN PRAKGELFNISMDRPVDYGEVAAHLARTRGLGSVDIASQFHSNWMDNSKARYLLDWKPVYDLEKLINSAWDYQRSKEEPR VVWYPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36535; Mature: 36535
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILVTGATGKVGQRFITGLLDEPRFSKARIRALCHNRVLEETDRISVVKGSIADSDVVA CEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH AAMDGVTHVVHLATCKEIRADVMDITVKGLFWLLEAFRTGPTAKQFILIGGDAGIGHFFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEE RHDGPVTEKTPHRAYPGCYALSKVLEEVMLEQFAIQYGINTCCLRAPWIMEKDDFKYTLF ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEECCCCEEEEE FGDDIFGGPDWKTLVPAADAERYAQDGTVPLLRDADGRPLKRNFVHVDDLVAAILAAIDN ECCCCCCCCCCCEECCCCCHHHHHCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHCC PRAKGELFNISMDRPVDYGEVAAHLARTRGLGSVDIASQFHSNWMDNSKARYLLDWKPVY CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHH DLEKLINSAWDYQRSKEEPRVVWYPG HHHHHHHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MLILVTGATGKVGQRFITGLLDEPRFSKARIRALCHNRVLEETDRISVVKGSIADSDVVA CEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH AAMDGVTHVVHLATCKEIRADVMDITVKGLFWLLEAFRTGPTAKQFILIGGDAGIGHFFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEE RHDGPVTEKTPHRAYPGCYALSKVLEEVMLEQFAIQYGINTCCLRAPWIMEKDDFKYTLF ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEECCCCEEEEE FGDDIFGGPDWKTLVPAADAERYAQDGTVPLLRDADGRPLKRNFVHVDDLVAAILAAIDN ECCCCCCCCCCCEECCCCCHHHHHCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHCC PRAKGELFNISMDRPVDYGEVAAHLARTRGLGSVDIASQFHSNWMDNSKARYLLDWKPVY CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHH DLEKLINSAWDYQRSKEEPRVVWYPG HHHHHHHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA