Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550457
Identifier: 209550457
GI number: 209550457
Start: 2930995
End: 2932134
Strand: Direct
Name: 209550457
Synonym: Rleg2_2880
Alternate gene names: NA
Gene position: 2930995-2932134 (Clockwise)
Preceding gene: 209550456
Following gene: 209550458
Centisome position: 64.59
GC content: 62.81
Gene sequence:
>1140_bases ATGGCACCCACGAGCAAGACATCGCATCCGTCACTATTGCGCTACATGCTTGCGCCTGACGATCAGGCCCGACAGGCGCT TGATGACACCATTGCCGCCTATCGCAGGATGACCGACATCCTGAGCGAACTCATCGACGAAAAGGCCGGCGCCAATCTCG TGGTCCTGCATGATCTTGCTTACGAAACCGTCCGCGAGCAGACGGGCCTGCCGGCGCGGCTGGTCACACTCGGCCTTCGT GATTTCGCCGCCAATCGGGGCGTCATCCCCGATCCGCTGCAACTGCCGCTCGACGATAAGCTCTTCGCCATCAAGGGCCC CTCGGATCTCACGATCGCCACGGTGCACGGACGTGTTGCCGTGCCTTTCGATGTCGCGGGCTATTCCAAGGGATGGGAGA GTATTTTTCCCGCATACCTTGTAGCGGACCACGATCGCTACGAGATTAACATCGGCGTCACGCCGCATTCCACTCGGATG GAGGAAAACATGACGAATGAAGGCATTCTTTCACGCATGGGTCGCCTGATCGCGGGCATCGCGAATGCAGCGATCGACAA AGCGGAAGGCGTCAACAAGATCGCCGTCATCGAACAGGCTATCCGCGAGATCGATGCGGCCGCCGAGGAAGCCCGCACCG ACCTCGGCAAGGCGCGGGCTGAGGAATACCGCATCCAGAGCCGCAAGGACGAAATCGTCGAAGACATGGACGCGCTCGAC GCGAAGATCCGCCTTGCCGTCTCCTCTGGACGGGATGATCTTGCAAAAGCCGGCGTCGCCCGTCAGATCGATCTCGAATC CCAGATCGCAGCGCTCGACAAGGCGCTGGCCGATGCCCGGGAGCAGTTGGACGAAGGCCAGAAAGCCCTGCAGGCCGTGC TCGCCACCCGCCGCGAGGCCGACGCCCGCCTTGCCGATTTCAAGCGCAGCATCGCCAAGCATCCCGAAGAAGCCGCAGCC GGCCATAACAGACCGACGCCAGGCGCAGGTGCCGCCCGCGCCGCCGCGGCAGTCTCGCGGCTGACCGGCGTTCCCGCGGG CGAGCACACCCATAGTTCCGAATTGGACGAGCTTGACCGGTTGCACCGCGAGCGGGCGATCGAGGCACGTCTCGCACGCT TCAAGACCGATAACCGGTAA
Upstream 100 bases:
>100_bases ATCGCTCTACGCCTCCCTCCGTCTAACGATACGTTAAACAAAGGTTGTATTTTTTGCGCCTCATCTTGAAAGCACAAAAG CGGTGCTTTATGTTTTATCC
Downstream 100 bases:
>100_bases CGCCGATGGCACTGTTCTTCGCCCCCGAATGTGCTCCCTTTGCCATCGCCGCCGCCGTGCTTGCGGGCCTGACGGCGATC GAAATGCTGGCCACCGTCAT
Product: phage shock protein A, PspA
Products: NA
Alternate protein names: PspA/IM30 Family Protein; Phage-Related Protein
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MAPTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLAYETVREQTGLPARLVTLGLR DFAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVAVPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRM EENMTNEGILSRMGRLIAGIANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALD AKIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREADARLADFKRSIAKHPEEAAA GHNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDRLHRERAIEARLARFKTDNR
Sequences:
>Translated_379_residues MAPTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLAYETVREQTGLPARLVTLGLR DFAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVAVPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRM EENMTNEGILSRMGRLIAGIANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALD AKIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREADARLADFKRSIAKHPEEAAA GHNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDRLHRERAIEARLARFKTDNR >Mature_378_residues APTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLAYETVREQTGLPARLVTLGLRD FAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVAVPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRME ENMTNEGILSRMGRLIAGIANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALDA KIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREADARLADFKRSIAKHPEEAAAG HNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDRLHRERAIEARLARFKTDNR
Specific function: Unknown
COG id: COG1842
COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41292; Mature: 41161
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLA CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH YETVREQTGLPARLVTLGLRDFAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVA HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEE VPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRMEENMTNEGILSRMGRLIAGI ECEECCCCCCCHHHHCCHHHEECCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHH ANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREA HHEEEEECCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DARLADFKRSIAKHPEEAAAGHNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDR HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LHRERAIEARLARFKTDNR HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure APTSKTSHPSLLRYMLAPDDQARQALDDTIAAYRRMTDILSELIDEKAGANLVVLHDLA CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH YETVREQTGLPARLVTLGLRDFAANRGVIPDPLQLPLDDKLFAIKGPSDLTIATVHGRVA HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCEEE VPFDVAGYSKGWESIFPAYLVADHDRYEINIGVTPHSTRMEENMTNEGILSRMGRLIAGI ECEECCCCCCCHHHHCCHHHEECCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHH ANAAIDKAEGVNKIAVIEQAIREIDAAAEEARTDLGKARAEEYRIQSRKDEIVEDMDALD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKIRLAVSSGRDDLAKAGVARQIDLESQIAALDKALADAREQLDEGQKALQAVLATRREA HHEEEEECCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DARLADFKRSIAKHPEEAAAGHNRPTPGAGAARAAAAVSRLTGVPAGEHTHSSELDELDR HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LHRERAIEARLARFKTDNR HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA