Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is yqeB [C]
Identifier: 209550442
GI number: 209550442
Start: 2916290
End: 2917105
Strand: Direct
Name: yqeB [C]
Synonym: Rleg2_2864
Alternate gene names: 209550442
Gene position: 2916290-2917105 (Clockwise)
Preceding gene: 209550441
Following gene: 209550444
Centisome position: 64.26
GC content: 67.16
Gene sequence:
>816_bases ATGACCGACCTCCCCACCTTCCTCACCACCCATCCCGACAGCGTCCTCATCGACATCACCGGCACCCAAGGCTCCACCCC GCGTGAAGCCGGCGCCTTTATGCTGGTCTCGCAAAACGCGCTCTGGGGCACGATCGGCGGCGGGCAGTTCGAGTTCATGG CCATCCGGAATGCCCGGGAGATGCTCGCGGGAACCGGCGGCGCACCAACCATGGATATTCCGCTCGGCCCCGAGATCGGC CAGTGCTGCGGTGGGCGCACGCAGCTGCGGTTTCGCCGGCTGACTGGGGCGGTGAGAGACGAAGTCGAAGCCACGCTTGC CGGCGAGATCGAGCGTCTGCCCGAGGTGCTTCTCTTCGGCGCCGGCCATGTCGGGCGGGCGTTGGCGGCGGCGCTGGCGC CCCTGCCACTGTCGGTGACGGTCGTCGAAACCAGGCAGGAGGAACTGACCAATCTGCCGGCGGAGACGAAGACCCGCCTC GTGCCGATGCCGGAAGCACTGGTGAAGGATATTCCGGCCGGCGGCGCAGTCGTCATTCTGACCCATGACCATGCGCTGGA CTTTCTCATCGCCCGCGAGGCGCTTGAGAGAAACGACCTTGCCTACACCGGCATGATCGGCTCGGCGACCAAACGCGCCA CCTTCGCAAGCTGGCTTTCCCGCGAAGGCGGGGGAGAGCGCGGCTGGATGGAGCGGCTGACGCTGCCGATCGGCGGCTCG GCGGTCAGGGACAAGCGCCCCGAAGTGATCGCCGCGATGAGTGCCGCCGAAATCCTGACGGCGCTTTCGGCCTACCGCAT GCGCTCGTCTTCGTAG
Upstream 100 bases:
>100_bases CGGCATTCTCCCTCTTCTCCCCAGCGCGGAGAAGGTGGCCCGAAGGGTCGGATGAGGGGGTCTTCGCGGCATACTCCAAC GACCGCGAGGTCCGGCTGCC
Downstream 100 bases:
>100_bases TAAGGGTCCCGCCCGTCGAGGAAACCGAGATCGCGCTTGACGCGGTCCGGCATTGCGGAAAAGTCGAGCCGAGGCAGACG GCAGAAACGGTTGGCGCTGC
Product: xanthine dehydrogenase accessory protein XdhC
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Dehydrogenase Accessory Protein; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; Xanthine Dehydrogenase Accessory Protein Xdhc; Xanthine Dehydrogenase Accessory Factor; XdhC Protein; Xanthine And CO Dehydrogenases Maturation Factor; Xanthine Dehydrogenase; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Chaperone XdhC; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTDLPTFLTTHPDSVLIDITGTQGSTPREAGAFMLVSQNALWGTIGGGQFEFMAIRNAREMLAGTGGAPTMDIPLGPEIG QCCGGRTQLRFRRLTGAVRDEVEATLAGEIERLPEVLLFGAGHVGRALAAALAPLPLSVTVVETRQEELTNLPAETKTRL VPMPEALVKDIPAGGAVVILTHDHALDFLIAREALERNDLAYTGMIGSATKRATFASWLSREGGGERGWMERLTLPIGGS AVRDKRPEVIAAMSAAEILTALSAYRMRSSS
Sequences:
>Translated_271_residues MTDLPTFLTTHPDSVLIDITGTQGSTPREAGAFMLVSQNALWGTIGGGQFEFMAIRNAREMLAGTGGAPTMDIPLGPEIG QCCGGRTQLRFRRLTGAVRDEVEATLAGEIERLPEVLLFGAGHVGRALAAALAPLPLSVTVVETRQEELTNLPAETKTRL VPMPEALVKDIPAGGAVVILTHDHALDFLIAREALERNDLAYTGMIGSATKRATFASWLSREGGGERGWMERLTLPIGGS AVRDKRPEVIAAMSAAEILTALSAYRMRSSS >Mature_270_residues TDLPTFLTTHPDSVLIDITGTQGSTPREAGAFMLVSQNALWGTIGGGQFEFMAIRNAREMLAGTGGAPTMDIPLGPEIGQ CCGGRTQLRFRRLTGAVRDEVEATLAGEIERLPEVLLFGAGHVGRALAAALAPLPLSVTVVETRQEELTNLPAETKTRLV PMPEALVKDIPAGGAVVILTHDHALDFLIAREALERNDLAYTGMIGSATKRATFASWLSREGGGERGWMERLTLPIGGSA VRDKRPEVIAAMSAAEILTALSAYRMRSSS
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28850; Mature: 28718
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLPTFLTTHPDSVLIDITGTQGSTPREAGAFMLVSQNALWGTIGGGQFEFMAIRNARE CCCCCCHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCEEEEEEHHHHHH MLAGTGGAPTMDIPLGPEIGQCCGGRTQLRFRRLTGAVRDEVEATLAGEIERLPEVLLFG HHHCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC AGHVGRALAAALAPLPLSVTVVETRQEELTNLPAETKTRLVPMPEALVKDIPAGGAVVIL CCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCHHHCEECCCCHHHHHHCCCCCEEEEE THDHALDFLIAREALERNDLAYTGMIGSATKRATFASWLSREGGGERGWMERLTLPIGGS ECCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHEECCCCCC AVRDKRPEVIAAMSAAEILTALSAYRMRSSS HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDLPTFLTTHPDSVLIDITGTQGSTPREAGAFMLVSQNALWGTIGGGQFEFMAIRNARE CCCCCHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEECCCCEEEEEEHHHHHH MLAGTGGAPTMDIPLGPEIGQCCGGRTQLRFRRLTGAVRDEVEATLAGEIERLPEVLLFG HHHCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC AGHVGRALAAALAPLPLSVTVVETRQEELTNLPAETKTRLVPMPEALVKDIPAGGAVVIL CCHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCHHHCEECCCCHHHHHHCCCCCEEEEE THDHALDFLIAREALERNDLAYTGMIGSATKRATFASWLSREGGGERGWMERLTLPIGGS ECCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHEECCCCCC AVRDKRPEVIAAMSAAEILTALSAYRMRSSS HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA