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The map label for this gene is yliI [C]

Identifier: 209550320

GI number: 209550320

Start: 2788158

End: 2789297

Strand: Direct

Name: yliI [C]

Synonym: Rleg2_2740

Alternate gene names: 209550320

Gene position: 2788158-2789297 (Clockwise)

Preceding gene: 209550319

Following gene: 209550322

Centisome position: 61.44

GC content: 63.6

Gene sequence:

>1140_bases
ATGAGAACATCCGCCTTTCATTTCGCCGCAGCGCTGGTTCTGCACGGCGCCGCATACGCCGATGCGGCCGAGACCGTCAA
TACGCAGGATCTTGCGGTCCGTGTCGACAAACTCGCTGACGGCCTCGAACATCCCTGGGCGGTCGAGGTGTTGCCCGATG
GCGCCTACCTCGTCACCGAGCGGCCGGGCCGCATGCGCATCATTCGCGACGGCAAGGTCTCCAGCCCGATCGACGGCGTG
CCCAAGGTTAGCGCCCGTGGCCAGGGCGGCCTGATGGATGTGGCGCTGGCTCCGGACTTTGCGACGTCGAGAAAACTCTA
TTTCACCGCCGCCATCGCCAATGGACAGGGCTCCGGCACCGAGGCCTTCAGCGCCACGCTTTTCGCCGACGAAAAGGCTC
TCAATGCCGTGACGCCTGTATTCACCATGCAGCGCTTCACCTCTGGCAATATCCAGTACGGCTCGCGCATCGCCATTGCC
CGTGATGGTTCGCTGTTCATCAGCGTCGGCGACCGCGGCGACCGCGACCGCTCGCAGGACTGGCGGGACGACGCCGGCTC
GATCATCCACATCAATGCCGATGGCAGCATCCCGGCCGACAATCCGTTCAAGGACGGCGGCAAAGCGCTGCCGGAAATCT
GGTCGAAAGGCCACCGCAACCCGCAGGGTATCACCTTCGATAGCAAGGACGGCAAGCTTTATACCGTCGAGCACGGCGCC
CGCGGCGGCGACGAGATCAATCAGCCCGAGGCGGGCAAGAATTACGGCTGGCCGATCATCACCTACGGCCGCGACTATTC
CGGCGCCGAGATCGGAGAAGGCACAGCGAAGAAAGGACTGGAACAGCCGCTGCATTACTGGGATCCGTCGATTGCGCCCG
GTGCGCTCGCTGTCTATCGCGGCGCGATGTTTCCGGAATGGGACGGCAATTTCATCGTCGCAGCGCTGAAGTTCCAGCTG
CTGTCGCGCATGCAACGCGACGAAAGCGGCGCCTTCGTCGCTGAGGAGCGGCTGTTCGAGGGCGAATACGGCCGCATTCG
CGATGTCATCGTCGCGCCCGACGGCGCACTGCTGATGGTGACCGACGAGGATAACGGCGCGCTGTTCAGGGTTTCACGCG
CTGAGGCCAATAACGGCTGA

Upstream 100 bases:

>100_bases
TTCAACCAGCAAACACAAAGCCGTTATATCAGGTCGCATGAGGGTTGAAGCTCTCCCCTGCCCGCTCCACCTTCAGCGTG
AGAGACGACGGGAAAACAAG

Downstream 100 bases:

>100_bases
AAGATCACAAGGCCCCGCGCAGCTCCTTGCGGATGACGAATTTCAGCCCGGACCAGATCTCGTCGACGGCGCAGACCTTG
ACGTCGACAAGACCGGTCGG

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRTSAFHFAAALVLHGAAYADAAETVNTQDLAVRVDKLADGLEHPWAVEVLPDGAYLVTERPGRMRIIRDGKVSSPIDGV
PKVSARGQGGLMDVALAPDFATSRKLYFTAAIANGQGSGTEAFSATLFADEKALNAVTPVFTMQRFTSGNIQYGSRIAIA
RDGSLFISVGDRGDRDRSQDWRDDAGSIIHINADGSIPADNPFKDGGKALPEIWSKGHRNPQGITFDSKDGKLYTVEHGA
RGGDEINQPEAGKNYGWPIITYGRDYSGAEIGEGTAKKGLEQPLHYWDPSIAPGALAVYRGAMFPEWDGNFIVAALKFQL
LSRMQRDESGAFVAEERLFEGEYGRIRDVIVAPDGALLMVTDEDNGALFRVSRAEANNG

Sequences:

>Translated_379_residues
MRTSAFHFAAALVLHGAAYADAAETVNTQDLAVRVDKLADGLEHPWAVEVLPDGAYLVTERPGRMRIIRDGKVSSPIDGV
PKVSARGQGGLMDVALAPDFATSRKLYFTAAIANGQGSGTEAFSATLFADEKALNAVTPVFTMQRFTSGNIQYGSRIAIA
RDGSLFISVGDRGDRDRSQDWRDDAGSIIHINADGSIPADNPFKDGGKALPEIWSKGHRNPQGITFDSKDGKLYTVEHGA
RGGDEINQPEAGKNYGWPIITYGRDYSGAEIGEGTAKKGLEQPLHYWDPSIAPGALAVYRGAMFPEWDGNFIVAALKFQL
LSRMQRDESGAFVAEERLFEGEYGRIRDVIVAPDGALLMVTDEDNGALFRVSRAEANNG
>Mature_379_residues
MRTSAFHFAAALVLHGAAYADAAETVNTQDLAVRVDKLADGLEHPWAVEVLPDGAYLVTERPGRMRIIRDGKVSSPIDGV
PKVSARGQGGLMDVALAPDFATSRKLYFTAAIANGQGSGTEAFSATLFADEKALNAVTPVFTMQRFTSGNIQYGSRIAIA
RDGSLFISVGDRGDRDRSQDWRDDAGSIIHINADGSIPADNPFKDGGKALPEIWSKGHRNPQGITFDSKDGKLYTVEHGA
RGGDEINQPEAGKNYGWPIITYGRDYSGAEIGEGTAKKGLEQPLHYWDPSIAPGALAVYRGAMFPEWDGNFIVAALKFQL
LSRMQRDESGAFVAEERLFEGEYGRIRDVIVAPDGALLMVTDEDNGALFRVSRAEANNG

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936955, Length=331, Percent_Identity=22.3564954682779, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI187936953, Length=331, Percent_Identity=22.3564954682779, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1787060, Length=379, Percent_Identity=39.5778364116095, Blast_Score=243, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 40897; Mature: 40897

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSAFHFAAALVLHGAAYADAAETVNTQDLAVRVDKLADGLEHPWAVEVLPDGAYLVTE
CCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHEEHHHHHCCCCCCEEEEEECCCEEEEEC
RPGRMRIIRDGKVSSPIDGVPKVSARGQGGLMDVALAPDFATSRKLYFTAAIANGQGSGT
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCC
EAFSATLFADEKALNAVTPVFTMQRFTSGNIQYGSRIAIARDGSLFISVGDRGDRDRSQD
CCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCEEEEEECCCCCCCCCCC
WRDDAGSIIHINADGSIPADNPFKDGGKALPEIWSKGHRNPQGITFDSKDGKLYTVEHGA
CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCC
RGGDEINQPEAGKNYGWPIITYGRDYSGAEIGEGTAKKGLEQPLHYWDPSIAPGALAVYR
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHHH
GAMFPEWDGNFIVAALKFQLLSRMQRDESGAFVAEERLFEGEYGRIRDVIVAPDGALLMV
CCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCEEEEEECCCCEEEEE
TDEDNGALFRVSRAEANNG
EECCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRTSAFHFAAALVLHGAAYADAAETVNTQDLAVRVDKLADGLEHPWAVEVLPDGAYLVTE
CCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHEEHHHHHCCCCCCEEEEEECCCEEEEEC
RPGRMRIIRDGKVSSPIDGVPKVSARGQGGLMDVALAPDFATSRKLYFTAAIANGQGSGT
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCC
EAFSATLFADEKALNAVTPVFTMQRFTSGNIQYGSRIAIARDGSLFISVGDRGDRDRSQD
CCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCEEEEEECCCCCCCCCCC
WRDDAGSIIHINADGSIPADNPFKDGGKALPEIWSKGHRNPQGITFDSKDGKLYTVEHGA
CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCC
RGGDEINQPEAGKNYGWPIITYGRDYSGAEIGEGTAKKGLEQPLHYWDPSIAPGALAVYR
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHHH
GAMFPEWDGNFIVAALKFQLLSRMQRDESGAFVAEERLFEGEYGRIRDVIVAPDGALLMV
CCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCEEEEEECCCCEEEEE
TDEDNGALFRVSRAEANNG
EECCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]