Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550319
Identifier: 209550319
GI number: 209550319
Start: 2787313
End: 2788032
Strand: Direct
Name: 209550319
Synonym: Rleg2_2739
Alternate gene names: NA
Gene position: 2787313-2788032 (Clockwise)
Preceding gene: 209550318
Following gene: 209550320
Centisome position: 61.42
GC content: 65.28
Gene sequence:
>720_bases ATGGTCTCTAGGCTCTCAGCAAGCCGGAGCGAGGAAGCGGTCGAATTCGAGCCGCTTCCGACCTATCTGGAACTCGCCAT GGCCGCCGCCACGGCCCACGACAGGCCCAAGGTGCGCCAAAGGAGAGTTTTTTTCCTCTGGCGTCTTTCCCCGATCGAAA AAGCGATCGCCGTCGCCATCGCCGGCCTTGCCCTTTATGGCTTGGCGCTGATCGGCGACGGCTTCCTGCTGAAGGCGAAG GCGGAGCTCTCGCAGATCCTGCTGAAACGCGCCTTCGCCGCCGAACTCAAGGGCGAGAAGACAAAACCCTGGCCCTGGGC GGATTTCACCACGGAGGCCAAGGTGCGCGCACCGCGCCTCGGCAAGGAGGCGATCGTGCTCTCCGGCGCCTCCGGCGAAG CCCTCGCCTTCGGCCCGGCCTGGCTTACCGATACGCCGCAGCCCGGCGAGCAAGGCACCTCGGTGATCGCCGCTCATCGC GACACGCATTTCCGCTGGCTGCAATATGTAAAACCCGGCGATACGATCGAGGTCACCCGCCGTGACGGCAAACTATTGAC CTTCAAGGCCGGCGAAGGCCGCATCGCCCCATGGGATGCCAGCGGCATCGACCCTTCCTCCAACGGCCGCCGCCTGGTGC TGACCACCTGCTGGCCCTTCGATGCGACCGAACGCGGGCCGCTACGCTACATCCTCGAGGCCGAACTGGTCGACGGGTAG
Upstream 100 bases:
>100_bases CGCGGGCTTACCATGCTGCTCCTGGCGCTGACGGCGGCAAGCGGGCTGGCCGTCTGGCGCCGGCGCATCAAGCGGTTGAT CGCGGTGGGAGCCAAGCCAA
Downstream 100 bases:
>100_bases AGCGTCTTTTGAATCCACGCATCCGTTCAACCAGCAAACACAAAGCCGTTATATCAGGTCGCATGAGGGTTGAAGCTCTC CCCTGCCCGCTCCACCTTCA
Product: sortase family protein
Products: NA
Alternate protein names: Peptidase; Sortase; Sortase-Like Protein; LPXTG-Site Transpeptidase Family Protein; Sortase Family Protein Peptidase C; Transpeptidase Protein; Sortase Family; Sortase-Like
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MVSRLSASRSEEAVEFEPLPTYLELAMAAATAHDRPKVRQRRVFFLWRLSPIEKAIAVAIAGLALYGLALIGDGFLLKAK AELSQILLKRAFAAELKGEKTKPWPWADFTTEAKVRAPRLGKEAIVLSGASGEALAFGPAWLTDTPQPGEQGTSVIAAHR DTHFRWLQYVKPGDTIEVTRRDGKLLTFKAGEGRIAPWDASGIDPSSNGRRLVLTTCWPFDATERGPLRYILEAELVDG
Sequences:
>Translated_239_residues MVSRLSASRSEEAVEFEPLPTYLELAMAAATAHDRPKVRQRRVFFLWRLSPIEKAIAVAIAGLALYGLALIGDGFLLKAK AELSQILLKRAFAAELKGEKTKPWPWADFTTEAKVRAPRLGKEAIVLSGASGEALAFGPAWLTDTPQPGEQGTSVIAAHR DTHFRWLQYVKPGDTIEVTRRDGKLLTFKAGEGRIAPWDASGIDPSSNGRRLVLTTCWPFDATERGPLRYILEAELVDG >Mature_239_residues MVSRLSASRSEEAVEFEPLPTYLELAMAAATAHDRPKVRQRRVFFLWRLSPIEKAIAVAIAGLALYGLALIGDGFLLKAK AELSQILLKRAFAAELKGEKTKPWPWADFTTEAKVRAPRLGKEAIVLSGASGEALAFGPAWLTDTPQPGEQGTSVIAAHR DTHFRWLQYVKPGDTIEVTRRDGKLLTFKAGEGRIAPWDASGIDPSSNGRRLVLTTCWPFDATERGPLRYILEAELVDG
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26252; Mature: 26252
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRLSASRSEEAVEFEPLPTYLELAMAAATAHDRPKVRQRRVFFLWRLSPIEKAIAVAI CCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHCEEEEEEECCHHHHHHHHHH AGLALYGLALIGDGFLLKAKAELSQILLKRAFAAELKGEKTKPWPWADFTTEAKVRAPRL HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC GKEAIVLSGASGEALAFGPAWLTDTPQPGEQGTSVIAAHRDTHFRWLQYVKPGDTIEVTR CCEEEEEECCCCCEEEECCEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEE RDGKLLTFKAGEGRIAPWDASGIDPSSNGRRLVLTTCWPFDATERGPLRYILEAELVDG CCCEEEEEECCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MVSRLSASRSEEAVEFEPLPTYLELAMAAATAHDRPKVRQRRVFFLWRLSPIEKAIAVAI CCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHCEEEEEEECCHHHHHHHHHH AGLALYGLALIGDGFLLKAKAELSQILLKRAFAAELKGEKTKPWPWADFTTEAKVRAPRL HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC GKEAIVLSGASGEALAFGPAWLTDTPQPGEQGTSVIAAHRDTHFRWLQYVKPGDTIEVTR CCEEEEEECCCCCEEEECCEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEE RDGKLLTFKAGEGRIAPWDASGIDPSSNGRRLVLTTCWPFDATERGPLRYILEAELVDG CCCEEEEEECCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA