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The map label for this gene is potB [C]

Identifier: 209550219

GI number: 209550219

Start: 2685573

End: 2686361

Strand: Direct

Name: potB [C]

Synonym: Rleg2_2639

Alternate gene names: 209550219

Gene position: 2685573-2686361 (Clockwise)

Preceding gene: 209550218

Following gene: 209550220

Centisome position: 59.18

GC content: 60.33

Gene sequence:

>789_bases
ATGAAAGCGCAACGTCTCGGAGCCTGGCTCGCCATCATCCTCGGCGCGTCCTATTTCATCATTCCGCTAATCGGCACCAT
TGAATTTTCGCTGCGAATGCGCCGCGGTGAATACAGTCTCGATGCCTATCAGTCGGTCTTCTCGGACGCCCAGTTCCGCG
AAACCTTCGGCTACTCCATGATGATGGCGCTTCTGACCATTGTCTTCGGCATGCTGCTCGTGGTGCCGACGGCCTACTGG
GTGCGGCTGCGGCTGCCGCAGATGCGCCCGGTCGTCGAATTCATCACGCTGCTGCCGCTGGTCATTCCGGCGATCGTCAT
CGTCTTCGGTTATCTCAGGATGTACAACTCGTCGTCCTACCTGCCGATGACCGGTTCAACGACCGGCACCAACATTCTGC
TGGTCTTCTCCTATATCACGCTGTCGCTGCCCTACATGTACCGCGCCGTCGATACCGCCATGCGCGCCATCGACGTCCGC
ACCCTGACGGAAGCGGCCGAGAGCCTCGGCGCCCGCTGGACGACCATCATGTTCAGGTGCATTTTCCCCAATGTCATGAG
CGGCGTGCTGTCGGGCGCTTTCATCACGCTCGCGATCGTCATGGGCGAATTCACCTTCGCCGCCTTGCTCAACCGTCCTG
CCTTCGGCCCCTACCTGCAGCTTGTCGGTGCCAACAAGGCTTATGAGCCTTCGGCGCTTGCCGTCATCGCCTTCTCGATC
ACCTGGCTCAGCATGGGCCTGCTCAACCTCGTTTCCCGCTTCGGCAAAGCCCGCCCGGCAAAGGCTTAA

Upstream 100 bases:

>100_bases
CCAACCTCGGCTACGCCATCGCGCTCGGAATGATCGTGATCACCGGCGTATCCAATGTCCTTTACCTCATGCTGCGCATG
CGCGCCGAACGGTGGCAGAA

Downstream 100 bases:

>100_bases
GGTATTCGGCTCATGTCCTTTCTCACACTGAACAACATTCAGAAATCCTTCGGCCCGGTCCAGGTCGTCAAGAACTTCAA
CATGAACATCGAGAAGGGCG

Product: binding-protein-dependent transporters inner membrane component

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease; ABC-Type Transporter Permease Component; ABC-Type Transport System Permease Protein; Permease Of ABC Transporter; Transmembrane Component Of ABC Transporter; ABC Transporter; Polyamine ABC Transporter Permease Protein; ABC Transporter Inner Membrane Subunit; ABC Transporter Membrane Protein; ABC Polyamine Transporter Inner Membrane Subunit; ABC Transport System Permease Protein; ABC TRANSPORTER Membrane Component; Spermidine/Putrescine ABC Transporter Permease Component; ABC Transporter Integral Membrane Subunit; ABC Transporter Inner Membrane Protein; ABC Transport System Permease Component; Abc Transporter Permease Fn; ABC Transporter Membrane Spanning Protein; Sulfate ABC Transporter Permease Protein CysT; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKAQRLGAWLAIILGASYFIIPLIGTIEFSLRMRRGEYSLDAYQSVFSDAQFRETFGYSMMMALLTIVFGMLLVVPTAYW
VRLRLPQMRPVVEFITLLPLVIPAIVIVFGYLRMYNSSSYLPMTGSTTGTNILLVFSYITLSLPYMYRAVDTAMRAIDVR
TLTEAAESLGARWTTIMFRCIFPNVMSGVLSGAFITLAIVMGEFTFAALLNRPAFGPYLQLVGANKAYEPSALAVIAFSI
TWLSMGLLNLVSRFGKARPAKA

Sequences:

>Translated_262_residues
MKAQRLGAWLAIILGASYFIIPLIGTIEFSLRMRRGEYSLDAYQSVFSDAQFRETFGYSMMMALLTIVFGMLLVVPTAYW
VRLRLPQMRPVVEFITLLPLVIPAIVIVFGYLRMYNSSSYLPMTGSTTGTNILLVFSYITLSLPYMYRAVDTAMRAIDVR
TLTEAAESLGARWTTIMFRCIFPNVMSGVLSGAFITLAIVMGEFTFAALLNRPAFGPYLQLVGANKAYEPSALAVIAFSI
TWLSMGLLNLVSRFGKARPAKA
>Mature_262_residues
MKAQRLGAWLAIILGASYFIIPLIGTIEFSLRMRRGEYSLDAYQSVFSDAQFRETFGYSMMMALLTIVFGMLLVVPTAYW
VRLRLPQMRPVVEFITLLPLVIPAIVIVFGYLRMYNSSSYLPMTGSTTGTNILLVFSYITLSLPYMYRAVDTAMRAIDVR
TLTEAAESLGARWTTIMFRCIFPNVMSGVLSGAFITLAIVMGEFTFAALLNRPAFGPYLQLVGANKAYEPSALAVIAFSI
TWLSMGLLNLVSRFGKARPAKA

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29135; Mature: 29135

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQRLGAWLAIILGASYFIIPLIGTIEFSLRMRRGEYSLDAYQSVFSDAQFRETFGYSM
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
MMALLTIVFGMLLVVPTAYWVRLRLPQMRPVVEFITLLPLVIPAIVIVFGYLRMYNSSSY
HHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPMTGSTTGTNILLVFSYITLSLPYMYRAVDTAMRAIDVRTLTEAAESLGARWTTIMFRC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IFPNVMSGVLSGAFITLAIVMGEFTFAALLNRPAFGPYLQLVGANKAYEPSALAVIAFSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHH
TWLSMGLLNLVSRFGKARPAKA
HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKAQRLGAWLAIILGASYFIIPLIGTIEFSLRMRRGEYSLDAYQSVFSDAQFRETFGYSM
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
MMALLTIVFGMLLVVPTAYWVRLRLPQMRPVVEFITLLPLVIPAIVIVFGYLRMYNSSSY
HHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPMTGSTTGTNILLVFSYITLSLPYMYRAVDTAMRAIDVRTLTEAAESLGARWTTIMFRC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IFPNVMSGVLSGAFITLAIVMGEFTFAALLNRPAFGPYLQLVGANKAYEPSALAVIAFSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHH
TWLSMGLLNLVSRFGKARPAKA
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA