Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is hexR [C]
Identifier: 209550216
GI number: 209550216
Start: 2682443
End: 2683315
Strand: Direct
Name: hexR [C]
Synonym: Rleg2_2636
Alternate gene names: 209550216
Gene position: 2682443-2683315 (Clockwise)
Preceding gene: 209550209
Following gene: 209550217
Centisome position: 59.11
GC content: 61.28
Gene sequence:
>873_bases GTGACAGTTGCGTCGAAGACGGTTTCGGACGTCATACACTCGCATTTCGGGGTGCTGACGCGCGCCGAGAAGCAACTGGC CGAAAGCCTTCTCGACAATTATCCGGTATCCGGTCTCGGCAGCATCACCACGATCGCCGAGAATGCCGGCGTTTCGACGC CGACCGTCGTGCGCATGGTGCAAAAGCTCGGTTTCAAGGGCTATCCGGACTTTCAGGCGCATCTGCATCTGGAGGTCGAG GCGACGATCTCCAACCCGATCGCCAAGCACGACCGCTGGGCCCAGAACGCGCCTGGCACGCATATCCTCAACCGTTTCGC CGATGCCATCATGAGCAATCTGCGCCAGACGCTGACCGATCTCGACACCGCGACTTTCGACAGCGTCGCCTCGCTGCTGT CGGACCGCAAGCGCGGCCTCTATTTCGTCGGCGGCCGCATCACCGGCGCGCTTGCCGAATATTTCTTCACCCACATGCAG GTGATTCGGCCGGCGACGACGCTGCTGTCGTCGAACTCCAGCAGCTGGCCGCAATATGCTCTCAACATGAATGCCGGCGA CATTCTGATCATCTTCGACATCCGCCGCTACGAGCAGGAGATGGTGAGCCTTGCCACTGCCGCTCGCAAACGCGGCGCAG AAATCGTCGTCTTCACCGACCAGTGGAGCTCGCCCGCCGCCAAGCTCGCCCGGCATGCCTTTCGCGTTCGGATCGAGGCG CCGTCGGCTTGGGACTCCTCCGTCGTCACCCTCTTCATCGTCGAAGCGCTCATCGAGGCCGTTCAGAATTCCACCTGGGA CGAGACGAAGGAGCGCATGAAGACGCTTGAGGGCTTGTTCGAGCAGACCAAGCTTTTCCGCAAACCGGGTTAG
Upstream 100 bases:
>100_bases TGAAAATTTCTTTTCATGACAGTAGTTGACATGGATTATGACAGCGTTGTTAACTTTGAGTGGGAAAGTGGCGCCAGACC ATCCCGGGGAGCATCGTTAA
Downstream 100 bases:
>100_bases GAGGGACAAGAAAAACAAAGGGGAGAACAAGGACGGACTTTCGCGGGAACAGGTCGTGTCGTCGCAAATAAAACACGTGT CGCAAACGCCTGCTATTCAT
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; Transcription Regulator; SIS Domain-Containing Protein; Sugar Isomerase; Transcriptional Regulator Rpir Family; N-Acylmannosamine Kinase; Transcriptional Regulator Protein RpiR Family; RpiR-Family Transcriptional Regulator; HTH-Type Transcriptional Regulator; Conserved Hypothethical Protein; Transcriptional Regulator RpiR Family SIS Domain; Transcription Regulator Protein; Helix-Turn-Helix Protein RpiR; N-Acetylmannosamine Kinase; Transcription Regulator RpiR Family; GlvR Family Transcriptional Regulator; RpiR Family Regulatory; HTH Transcriptional Regulator Sugar Isomerasedomain; Transcriptional Regulator Protein; Transcriptional Regulator Family Protein; HTH/SIS Domain-Containing Protein; Transcriptional Regulator RpiR Family Protein; Helix-Turn-Helix Domain RpiR Family; RpiR Family Transcription Regulator
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTVASKTVSDVIHSHFGVLTRAEKQLAESLLDNYPVSGLGSITTIAENAGVSTPTVVRMVQKLGFKGYPDFQAHLHLEVE ATISNPIAKHDRWAQNAPGTHILNRFADAIMSNLRQTLTDLDTATFDSVASLLSDRKRGLYFVGGRITGALAEYFFTHMQ VIRPATTLLSSNSSSWPQYALNMNAGDILIIFDIRRYEQEMVSLATAARKRGAEIVVFTDQWSSPAAKLARHAFRVRIEA PSAWDSSVVTLFIVEALIEAVQNSTWDETKERMKTLEGLFEQTKLFRKPG
Sequences:
>Translated_290_residues MTVASKTVSDVIHSHFGVLTRAEKQLAESLLDNYPVSGLGSITTIAENAGVSTPTVVRMVQKLGFKGYPDFQAHLHLEVE ATISNPIAKHDRWAQNAPGTHILNRFADAIMSNLRQTLTDLDTATFDSVASLLSDRKRGLYFVGGRITGALAEYFFTHMQ VIRPATTLLSSNSSSWPQYALNMNAGDILIIFDIRRYEQEMVSLATAARKRGAEIVVFTDQWSSPAAKLARHAFRVRIEA PSAWDSSVVTLFIVEALIEAVQNSTWDETKERMKTLEGLFEQTKLFRKPG >Mature_289_residues TVASKTVSDVIHSHFGVLTRAEKQLAESLLDNYPVSGLGSITTIAENAGVSTPTVVRMVQKLGFKGYPDFQAHLHLEVEA TISNPIAKHDRWAQNAPGTHILNRFADAIMSNLRQTLTDLDTATFDSVASLLSDRKRGLYFVGGRITGALAEYFFTHMQV IRPATTLLSSNSSSWPQYALNMNAGDILIIFDIRRYEQEMVSLATAARKRGAEIVVFTDQWSSPAAKLARHAFRVRIEAP SAWDSSVVTLFIVEALIEAVQNSTWDETKERMKTLEGLFEQTKLFRKPG
Specific function: Represses The Expression Of The Hex Regulon (Zwf, Eda, Glp And Gap) (By Similarity). [C]
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32189; Mature: 32058
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVASKTVSDVIHSHFGVLTRAEKQLAESLLDNYPVSGLGSITTIAENAGVSTPTVVRMV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHH QKLGFKGYPDFQAHLHLEVEATISNPIAKHDRWAQNAPGTHILNRFADAIMSNLRQTLTD HHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LDTATFDSVASLLSDRKRGLYFVGGRITGALAEYFFTHMQVIRPATTLLSSNSSSWPQYA HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE LNMNAGDILIIFDIRRYEQEMVSLATAARKRGAEIVVFTDQWSSPAAKLARHAFRVRIEA EECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHEEEEC PSAWDSSVVTLFIVEALIEAVQNSTWDETKERMKTLEGLFEQTKLFRKPG CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVASKTVSDVIHSHFGVLTRAEKQLAESLLDNYPVSGLGSITTIAENAGVSTPTVVRMV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHH QKLGFKGYPDFQAHLHLEVEATISNPIAKHDRWAQNAPGTHILNRFADAIMSNLRQTLTD HHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LDTATFDSVASLLSDRKRGLYFVGGRITGALAEYFFTHMQVIRPATTLLSSNSSSWPQYA HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE LNMNAGDILIIFDIRRYEQEMVSLATAARKRGAEIVVFTDQWSSPAAKLARHAFRVRIEA EECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHEEEEC PSAWDSSVVTLFIVEALIEAVQNSTWDETKERMKTLEGLFEQTKLFRKPG CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA