Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550116
Identifier: 209550116
GI number: 209550116
Start: 2564256
End: 2566280
Strand: Direct
Name: 209550116
Synonym: Rleg2_2533
Alternate gene names: NA
Gene position: 2564256-2566280 (Clockwise)
Preceding gene: 209550113
Following gene: 209550118
Centisome position: 56.51
GC content: 64.4
Gene sequence:
>2025_bases TTGCTCAACAACGACTTGCGCGTGTCTGGCAAGGCAGGCGAGCACGATCGACGCGACGGCCATGCGCCGGGAAATCGCTT TCTCGGCCGCGTCGTTGCCTGCAGCGGCTCGCGGGCGACGATTGCCGCCGTCGCCGAAGAAGGCGGCACCGATCTGACCG AACTCTGGTCCGTCGGCCGGCTGATTTCGATCAGCGTCGGCCGCAACCGCGTCGTTGCCCTCGTCTATCAGATGAACACC GGCAGCCATGCCTGGGGCGAAGGCGAGGACAACAATTTCAAGATCGAGACCGAACTGCTCGGCGAAGTCCGTGTCGATGA GGACGGGCACGAGGAATTCTCGACCGGCATTTCGCGTTATCCCTATCTCGGCGCCATCGCCCACCGCATCCGCGCCGCCG ACCTGATGCGCATCTATGATGCCGGAGAAGGCACGACTGCCGTCATCGGCAAGCTGACCCAGGACGAAAGCATCGATGCG GCGATCCACATCCCCTCGATGCTCTCCAAGCATTTCGCCGTCGTCGGCTCCACCGGGGTCGGCAAGTCGACCGCCGTGTC GCTGCTGCTGCATAAGGCGATCGCAGCCAACCCGAAGCTGCGGGTACTGATCCTCGATCCGCACAACGAATTCGCCGCCG CATTCCCCAAGCATGCCGTCACCATCGATACCGATACGCTCGACCTGCCCTTCTGGCTGATGCGGCTGGAGGAATTCGCC GAAGTCGTCTTTCGCGGCCGCCCGCCGGTGCCGGAAGAACTCGACATGCTGCGCGATATCCTACCCGAGGCCAAGCGCGC CTTCCGCGGCAGCGACAACTCGCTGGTGCGCCGCACGACGGAAAAGAGCTCGATCACCGCGGACACGCCGGTTCCCTACC GCATGGCCGATCTGCTGGCGCTGATCGACGAGCGCATCGGCCGCCTGGAAGGCCGCACGGAAAAACCTTTCCTGCGGTCG CTGAAGATGCGCCTCATCGCCGCGATCAACGATCCGCGCTATCACTTCATGTTCTCCAACAACACGATCAGCGACACGAT CACCGAGACCATCGCGCAGATTTTCCGCATTCCCGGCGAAAACCGGCCGATCTGCACCTTCCAGCTGGCCGGCATCCCCT CCGAGGTGGTCAATTCGGTCGCCTCCGTGCTCTGCCGCATGGCCTTCGAAGTGGCGCTGTGGAGCGAGGGCGCCATCCAT ATGCTCGTCGTCTGCGAGGAAGCCCACCGCTATATCCCCTCCGATCCGACCCTCGGCTTTGTGCCGACCCGTCAGGCAAT CGCCCGCATCGCCAAGGAAGGCCGCAAATACGGCGTCTCGCTCGGGATCATCACCCAGCGGCCGGGCGAGCTCGATCAGA CGATCCTGTCGCAGTGCTCGACGCTCTTTGCCATGCGCCTTGCCAACGACCGCGACCAGGAAATCATCCGCTCGGCCATC CCGAATTCGTCGATCTCGACGACGAGCTTCATCTCCTCGATCGGCAACGGCGAGGCGATCGCCTTCGGCGAGGCGATCAG CGTGCCGATGCGTATGCGCTTTTCCCGCGTCGACGAGAGCCTGCTGCCGAAGGCCGCCAGCGCCAACAGCAAACACAGCG AGGAAGATCCGGATACGGTCGATCTGCGCAAGATCGTCACCCGCATGCGGGCGGTGACCGTCGGACCCGACATTTCGAAT TTCCAGCAGAGCTATGCTGCATCAGCGGCAGCCCCCGACGAGGTTGATGCGTTCGACGAGGAAATCGACGCAAAGCCCTA TACGCCGCCTGCCCCGTCGTCCGCGCCGCTCGAATCCTACCGGCGCGAACTGCTGCCGCAGACACCGCGGCTTGACCCCG CCGCGCCGCCGGCGATCGATCCCCGGCTGGATGCGCTCCGCCGCGAGATGCGCCGCGAAGAACCGGTCTTTGCCCGGCCG GCGCCTCCGGCCGACCAGCCCGCAATCACCCGCCGGGAGCCCGGCCCGTCGCTGCGCGAAAGCATTCTGAAAAAGCCGCT GAGCAGCCTTTACAACAAGGATTGA
Upstream 100 bases:
>100_bases AAAAATCCATCCGCGCTCCTTTACCCTCTAAAAACCATGGTTTGAAGGATTTGTTAAAGGATGGACTTTATTATTAAGCC CCATTGCAGGGAGTAGCCCT
Downstream 100 bases:
>100_bases TGCGGCTGCCCCGTCTCCTGGGCGATCAGCGGCCGGGCAGCGTCGAGCACCCGTTGGCGGTCCGCCGATCCTAGCGGCAA GAGTGGCCGCGGAAGCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 674; Mature: 674
Protein sequence:
>674_residues MLNNDLRVSGKAGEHDRRDGHAPGNRFLGRVVACSGSRATIAAVAEEGGTDLTELWSVGRLISISVGRNRVVALVYQMNT GSHAWGEGEDNNFKIETELLGEVRVDEDGHEEFSTGISRYPYLGAIAHRIRAADLMRIYDAGEGTTAVIGKLTQDESIDA AIHIPSMLSKHFAVVGSTGVGKSTAVSLLLHKAIAANPKLRVLILDPHNEFAAAFPKHAVTIDTDTLDLPFWLMRLEEFA EVVFRGRPPVPEELDMLRDILPEAKRAFRGSDNSLVRRTTEKSSITADTPVPYRMADLLALIDERIGRLEGRTEKPFLRS LKMRLIAAINDPRYHFMFSNNTISDTITETIAQIFRIPGENRPICTFQLAGIPSEVVNSVASVLCRMAFEVALWSEGAIH MLVVCEEAHRYIPSDPTLGFVPTRQAIARIAKEGRKYGVSLGIITQRPGELDQTILSQCSTLFAMRLANDRDQEIIRSAI PNSSISTTSFISSIGNGEAIAFGEAISVPMRMRFSRVDESLLPKAASANSKHSEEDPDTVDLRKIVTRMRAVTVGPDISN FQQSYAASAAAPDEVDAFDEEIDAKPYTPPAPSSAPLESYRRELLPQTPRLDPAAPPAIDPRLDALRREMRREEPVFARP APPADQPAITRREPGPSLRESILKKPLSSLYNKD
Sequences:
>Translated_674_residues MLNNDLRVSGKAGEHDRRDGHAPGNRFLGRVVACSGSRATIAAVAEEGGTDLTELWSVGRLISISVGRNRVVALVYQMNT GSHAWGEGEDNNFKIETELLGEVRVDEDGHEEFSTGISRYPYLGAIAHRIRAADLMRIYDAGEGTTAVIGKLTQDESIDA AIHIPSMLSKHFAVVGSTGVGKSTAVSLLLHKAIAANPKLRVLILDPHNEFAAAFPKHAVTIDTDTLDLPFWLMRLEEFA EVVFRGRPPVPEELDMLRDILPEAKRAFRGSDNSLVRRTTEKSSITADTPVPYRMADLLALIDERIGRLEGRTEKPFLRS LKMRLIAAINDPRYHFMFSNNTISDTITETIAQIFRIPGENRPICTFQLAGIPSEVVNSVASVLCRMAFEVALWSEGAIH MLVVCEEAHRYIPSDPTLGFVPTRQAIARIAKEGRKYGVSLGIITQRPGELDQTILSQCSTLFAMRLANDRDQEIIRSAI PNSSISTTSFISSIGNGEAIAFGEAISVPMRMRFSRVDESLLPKAASANSKHSEEDPDTVDLRKIVTRMRAVTVGPDISN FQQSYAASAAAPDEVDAFDEEIDAKPYTPPAPSSAPLESYRRELLPQTPRLDPAAPPAIDPRLDALRREMRREEPVFARP APPADQPAITRREPGPSLRESILKKPLSSLYNKD >Mature_674_residues MLNNDLRVSGKAGEHDRRDGHAPGNRFLGRVVACSGSRATIAAVAEEGGTDLTELWSVGRLISISVGRNRVVALVYQMNT GSHAWGEGEDNNFKIETELLGEVRVDEDGHEEFSTGISRYPYLGAIAHRIRAADLMRIYDAGEGTTAVIGKLTQDESIDA AIHIPSMLSKHFAVVGSTGVGKSTAVSLLLHKAIAANPKLRVLILDPHNEFAAAFPKHAVTIDTDTLDLPFWLMRLEEFA EVVFRGRPPVPEELDMLRDILPEAKRAFRGSDNSLVRRTTEKSSITADTPVPYRMADLLALIDERIGRLEGRTEKPFLRS LKMRLIAAINDPRYHFMFSNNTISDTITETIAQIFRIPGENRPICTFQLAGIPSEVVNSVASVLCRMAFEVALWSEGAIH MLVVCEEAHRYIPSDPTLGFVPTRQAIARIAKEGRKYGVSLGIITQRPGELDQTILSQCSTLFAMRLANDRDQEIIRSAI PNSSISTTSFISSIGNGEAIAFGEAISVPMRMRFSRVDESLLPKAASANSKHSEEDPDTVDLRKIVTRMRAVTVGPDISN FQQSYAASAAAPDEVDAFDEEIDAKPYTPPAPSSAPLESYRRELLPQTPRLDPAAPPAIDPRLDALRREMRREEPVFARP APPADQPAITRREPGPSLRESILKKPLSSLYNKD
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1565 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 74141; Mature: 74141
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNNDLRVSGKAGEHDRRDGHAPGNRFLGRVVACSGSRATIAAVAEEGGTDLTELWSVGR CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEHHCCCCCHHHHHHCCC LISISVGRNRVVALVYQMNTGSHAWGEGEDNNFKIETELLGEVRVDEDGHEEFSTGISRY EEEEECCCCEEEEEEEEECCCCCCCCCCCCCCEEEEHEEECCEECCCCCHHHHHHHHHCC PYLGAIAHRIRAADLMRIYDAGEGTTAVIGKLTQDESIDAAIHIPSMLSKHFAVVGSTGV CHHHHHHHHHHHHHHHHHHCCCCCCEEHHEECCCCCCCCCEEECHHHHHHHHEEEECCCC GKSTAVSLLLHKAIAANPKLRVLILDPHNEFAAAFPKHAVTIDTDTLDLPFWLMRLEEFA CHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH EVVFRGRPPVPEELDMLRDILPEAKRAFRGSDNSLVRRTTEKSSITADTPVPYRMADLLA HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHH LIDERIGRLEGRTEKPFLRSLKMRLIAAINDPRYHFMFSNNTISDTITETIAQIFRIPGE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC NRPICTFQLAGIPSEVVNSVASVLCRMAFEVALWSEGAIHMLVVCEEAHRYIPSDPTLGF CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCCCC VPTRQAIARIAKEGRKYGVSLGIITQRPGELDQTILSQCSTLFAMRLANDRDQEIIRSAI CCCHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC PNSSISTTSFISSIGNGEAIAFGEAISVPMRMRFSRVDESLLPKAASANSKHSEEDPDTV CCCCCHHHHHHHHCCCCCEEEECHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHH DLRKIVTRMRAVTVGPDISNFQQSYAASAAAPDEVDAFDEEIDAKPYTPPAPSSAPLESY HHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHH RRELLPQTPRLDPAAPPAIDPRLDALRREMRREEPVFARPAPPADQPAITRREPGPSLRE HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH SILKKPLSSLYNKD HHHHHHHHHHHCCC >Mature Secondary Structure MLNNDLRVSGKAGEHDRRDGHAPGNRFLGRVVACSGSRATIAAVAEEGGTDLTELWSVGR CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEHHCCCCCHHHHHHCCC LISISVGRNRVVALVYQMNTGSHAWGEGEDNNFKIETELLGEVRVDEDGHEEFSTGISRY EEEEECCCCEEEEEEEEECCCCCCCCCCCCCCEEEEHEEECCEECCCCCHHHHHHHHHCC PYLGAIAHRIRAADLMRIYDAGEGTTAVIGKLTQDESIDAAIHIPSMLSKHFAVVGSTGV CHHHHHHHHHHHHHHHHHHCCCCCCEEHHEECCCCCCCCCEEECHHHHHHHHEEEECCCC GKSTAVSLLLHKAIAANPKLRVLILDPHNEFAAAFPKHAVTIDTDTLDLPFWLMRLEEFA CHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH EVVFRGRPPVPEELDMLRDILPEAKRAFRGSDNSLVRRTTEKSSITADTPVPYRMADLLA HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHH LIDERIGRLEGRTEKPFLRSLKMRLIAAINDPRYHFMFSNNTISDTITETIAQIFRIPGE HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC NRPICTFQLAGIPSEVVNSVASVLCRMAFEVALWSEGAIHMLVVCEEAHRYIPSDPTLGF CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCCCC VPTRQAIARIAKEGRKYGVSLGIITQRPGELDQTILSQCSTLFAMRLANDRDQEIIRSAI CCCHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC PNSSISTTSFISSIGNGEAIAFGEAISVPMRMRFSRVDESLLPKAASANSKHSEEDPDTV CCCCCHHHHHHHHCCCCCEEEECHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHH DLRKIVTRMRAVTVGPDISNFQQSYAASAAAPDEVDAFDEEIDAKPYTPPAPSSAPLESY HHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHH RRELLPQTPRLDPAAPPAIDPRLDALRREMRREEPVFARPAPPADQPAITRREPGPSLRE HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH SILKKPLSSLYNKD HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]