| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ydeG [H]
Identifier: 209549375
GI number: 209549375
Start: 1823868
End: 1825097
Strand: Reverse
Name: ydeG [H]
Synonym: Rleg2_1780
Alternate gene names: 209549375
Gene position: 1825097-1823868 (Counterclockwise)
Preceding gene: 209549376
Following gene: 209549373
Centisome position: 40.22
GC content: 65.37
Gene sequence:
>1230_bases ATGAACGTCATGCATCAGGACTCGGCCGACCCGGTAGCCGCAAAGCGCAACTCCTGGGTGCTCACCGTTGCGCAGGCCTT CGGGGGCGCCAATGCTCCAATCATCGTCTCGCTCGGCGGCCTGGTCGGGCAGCATCTGTCGACCGATCCGGATCTCGTCA CGCTTCCCGTCAGCCTGCTCAGCCTTGGGCTGGCACTCGGGACTCTGCCTGCCGCCTGGGTGATGCGTCGGTTCGGACGC AAGCCCGGATATCTGCTGGGCTCGGTGACCGGCATGGTTTCGGGCCTGATCGCTGCACTGGGGATCGTGCTCTCCAGCTT CCTGGTTTTCTGCCTCGGCACCTGCCTCGCCGGTTTCTATTCCTCCTATGTGCAGAGCTACCGCTTCGCCGCGACCGACA ACACCACTGCAGCGCAGAGCCATAAAGCGATCGTCCGCGTCATGGTCGGCGGCCTGATCGCCGCGATCATTGGCCCGCAG CTCGTCATCTGGACGCGCGACGCTTTGCCGGGGACACCCTTCGCCGGGAGCTTCCTCAGCCAGGCCGTTCTCGCCGCCCT GGCGTTTCCGGTGCTGCTCATGCTTCGCACATCGACGCCGCCGACGGCTCACGCGTCGGAAAGCGCCCTGGAGCGGCCCC TTGCCCAGATTCTGACATCGCCGCGCTATCTGCTCGCCATCGCAACCGGTGTCGTGTCCTACGGGCTGATGACCTTCGTG ATGACTGCGTCGCCGATCGCGATGGTCGGGCATGGTCACTCGATCGACCAGGCGGCATTGGGCATCCAATGGCATATTCT CGCCATGTATGCGCCGAGCTTCGTCACCGGCCGCCTGATGGTGCGTTTCGGCAAGGAACGGGTCGCGGCCGTCGGTCTGC TCCTCATCGGCTGCTCGGCGGCCGTCGCGCTCTCCGGCTTCGACATCTCCCATTTCTGGCTCTCGCTGGTTCTGCTCGGG ATCGGTTGGAACTTCGGCTTCATCGGAGCAACCGCCATGGTGGCCGACTGCCATACGCCGGCCGAACGCAGCAAGGTACA GGGGGCAAACGACTTCGTGGTCTTCGGTACGGTCGCCTGCGCGTCCTTCTCCGCCGGGTCGCTTCTCCACAGCTCCGGCT GGGAAACGATCAACTGGATCGTGCTTCCGGCAGTCGCCCTGGTGCTGGTTCCCTTGGTCTGGCGGGCGGCGCGGCCCGGC GATCACTCGGGAAGTCCGGCCTTGCGGTAG
Upstream 100 bases:
>100_bases CCGGAAGCGAGACAAGTCCTTCCGAACCTGGTTATCTCGCCGGCGCAGTCGTCGCTGCCGGTCGCGCGGTCGCCGACATT CTGTCGAAGATGGATTCCCG
Downstream 100 bases:
>100_bases CCATCGACGAAATGCTCGAGCGTCCGAGCGTCGCGGAATGGCTCGGTCGCCGCCCAGTGGCGAATGGAGAAATGCGGGTT GGCGACGAGGAAGAGATCGG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MNVMHQDSADPVAAKRNSWVLTVAQAFGGANAPIIVSLGGLVGQHLSTDPDLVTLPVSLLSLGLALGTLPAAWVMRRFGR KPGYLLGSVTGMVSGLIAALGIVLSSFLVFCLGTCLAGFYSSYVQSYRFAATDNTTAAQSHKAIVRVMVGGLIAAIIGPQ LVIWTRDALPGTPFAGSFLSQAVLAALAFPVLLMLRTSTPPTAHASESALERPLAQILTSPRYLLAIATGVVSYGLMTFV MTASPIAMVGHGHSIDQAALGIQWHILAMYAPSFVTGRLMVRFGKERVAAVGLLLIGCSAAVALSGFDISHFWLSLVLLG IGWNFGFIGATAMVADCHTPAERSKVQGANDFVVFGTVACASFSAGSLLHSSGWETINWIVLPAVALVLVPLVWRAARPG DHSGSPALR
Sequences:
>Translated_409_residues MNVMHQDSADPVAAKRNSWVLTVAQAFGGANAPIIVSLGGLVGQHLSTDPDLVTLPVSLLSLGLALGTLPAAWVMRRFGR KPGYLLGSVTGMVSGLIAALGIVLSSFLVFCLGTCLAGFYSSYVQSYRFAATDNTTAAQSHKAIVRVMVGGLIAAIIGPQ LVIWTRDALPGTPFAGSFLSQAVLAALAFPVLLMLRTSTPPTAHASESALERPLAQILTSPRYLLAIATGVVSYGLMTFV MTASPIAMVGHGHSIDQAALGIQWHILAMYAPSFVTGRLMVRFGKERVAAVGLLLIGCSAAVALSGFDISHFWLSLVLLG IGWNFGFIGATAMVADCHTPAERSKVQGANDFVVFGTVACASFSAGSLLHSSGWETINWIVLPAVALVLVPLVWRAARPG DHSGSPALR >Mature_409_residues MNVMHQDSADPVAAKRNSWVLTVAQAFGGANAPIIVSLGGLVGQHLSTDPDLVTLPVSLLSLGLALGTLPAAWVMRRFGR KPGYLLGSVTGMVSGLIAALGIVLSSFLVFCLGTCLAGFYSSYVQSYRFAATDNTTAAQSHKAIVRVMVGGLIAAIIGPQ LVIWTRDALPGTPFAGSFLSQAVLAALAFPVLLMLRTSTPPTAHASESALERPLAQILTSPRYLLAIATGVVSYGLMTFV MTASPIAMVGHGHSIDQAALGIQWHILAMYAPSFVTGRLMVRFGKERVAAVGLLLIGCSAAVALSGFDISHFWLSLVLLG IGWNFGFIGATAMVADCHTPAERSKVQGANDFVVFGTVACASFSAGSLLHSSGWETINWIVLPAVALVLVPLVWRAARPG DHSGSPALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42749; Mature: 42749
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVMHQDSADPVAAKRNSWVLTVAQAFGGANAPIIVSLGGLVGQHLSTDPDLVTLPVSLL CCCCCCCCCCCCHHCCCCEEEEEHHHCCCCCCCEEEEECHHHHHCCCCCCCEEEHHHHHH SLGLALGTLPAAWVMRRFGRKPGYLLGSVTGMVSGLIAALGIVLSSFLVFCLGTCLAGFY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSYVQSYRFAATDNTTAAQSHKAIVRVMVGGLIAAIIGPQLVIWTRDALPGTPFAGSFLS HHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHH QAVLAALAFPVLLMLRTSTPPTAHASESALERPLAQILTSPRYLLAIATGVVSYGLMTFV HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MTASPIAMVGHGHSIDQAALGIQWHILAMYAPSFVTGRLMVRFGKERVAAVGLLLIGCSA HHCCCCEEECCCCCHHHHHHCHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVALSGFDISHFWLSLVLLGIGWNFGFIGATAMVADCHTPAERSKVQGANDFVVFGTVAC HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEHHHH ASFSAGSLLHSSGWETINWIVLPAVALVLVPLVWRAARPGDHSGSPALR HCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNVMHQDSADPVAAKRNSWVLTVAQAFGGANAPIIVSLGGLVGQHLSTDPDLVTLPVSLL CCCCCCCCCCCCHHCCCCEEEEEHHHCCCCCCCEEEEECHHHHHCCCCCCCEEEHHHHHH SLGLALGTLPAAWVMRRFGRKPGYLLGSVTGMVSGLIAALGIVLSSFLVFCLGTCLAGFY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSYVQSYRFAATDNTTAAQSHKAIVRVMVGGLIAAIIGPQLVIWTRDALPGTPFAGSFLS HHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHH QAVLAALAFPVLLMLRTSTPPTAHASESALERPLAQILTSPRYLLAIATGVVSYGLMTFV HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MTASPIAMVGHGHSIDQAALGIQWHILAMYAPSFVTGRLMVRFGKERVAAVGLLLIGCSA HHCCCCEEECCCCCHHHHHHCHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVALSGFDISHFWLSLVLLGIGWNFGFIGATAMVADCHTPAERSKVQGANDFVVFGTVAC HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEHHHH ASFSAGSLLHSSGWETINWIVLPAVALVLVPLVWRAARPGDHSGSPALR HCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]