Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is recG [H]
Identifier: 209549324
GI number: 209549324
Start: 1765743
End: 1767848
Strand: Reverse
Name: recG [H]
Synonym: Rleg2_1728
Alternate gene names: 209549324
Gene position: 1767848-1765743 (Counterclockwise)
Preceding gene: 209549328
Following gene: 209549309
Centisome position: 38.96
GC content: 65.24
Gene sequence:
>2106_bases ATGCGCCCCGCCATTCTCGATCCTCTGTTTTCTCCCATTTCGGGCCTTCCGGGCGTTGGCCCGAAGATCGCCGAACTGCT GGTCAAGCTGCTCGGCCGCGAGACGCCGGAGGATTGCCGGGTCATCGATCTCATCTTCCACGCGCCGTTTTCGCTGATCG ACCGGCGCAACCAGCCGGGGATCGCCCGCGCGCCGCAGGGCGCGATCGTGACGATCACCGCCCGTGTCGACCGGCACCAG GTTCCGCCGCGCGGCAAGAGCAATGTCCCCTACCGCGTCTTCCTGCATGACGAGACCGGCGAGCTGACGCTGGTCTTTTT CCGCGGCCAGGCGGCTTGGCTGGAAAAACAGCTGCCTGTCGACGCTGAGGTGACGGTCAGCGGCAAGGTCGACTGGTTCA ACGGCCGCGCCTCGATGGTGCATCCCGATTATATCGTCAGGGCTGATGAAGCGGAGAACCTGCCGCTCGTCGAGCCGATC TATCCGCTGACGGCGGGGCTTTCGCCGAAGACATTGCGCAAGATCATCGACGCCGCCCTGCCGCGGTTTCCCGAGCTGCC GGAATGGATCGACCAGGCGCTGGCGCAGAAGCAGGGACTACCAACAATCCGCGACAGCTTCCACATGTTGCACGAGCCGC GCGACCCGGCCGATATCGACGCGCAGGCCCCTGCCCGGCGGCGGCTTGCCTATGACGAATTCCTTGCCGGTCAGCTGTCG CTGAGCCTGGTGCGCCAGAGGCTGCGCAAGGTGGCGGGCCAGCCGGTGCAAGCGACGGGCGAAGTCAGCGCCAAAATCCT GAAATCCCTGCCCTTCTCGCTCACATCGAGCCAGAACGAGGCGATCGCCGAGGTTTTGAAGGACATGGCCGGCACCGAGC GCATGCTGCGCCTGCTGCAGGGCGATGTCGGTTCCGGCAAGACGCTGGTGGCGCTGATGGCGATGGCAGCGGTGATCGAA AGCGGCGGCCAGGCCGTGCTGATGGCACCGACCGAAATCCTGGCGCGCCAGCACCATGCGACAATCTCGAAATTCGCCGC CTCCGCCGGGCTTGGCATCGAGATCCTGACCGGCCGCACCAAGGGGCGCGAGCGGGAGGAGATCCTCGACCGCATCGCCT CGGGCGCCGCGCAAATCATTATCGGCACGCATGCGCTGTTCCAGGACAGCGTCGCTTACGCCAAGCTGATGCTGGCCGTC GTCGACGAGCAACACCGTTTCGGTGTGCATCAGCGCCTGAGATTGACTGCCAAGGGCATCTCGCCGCACATGCTGGTGAT GACGGCGACGCCGATCCCGCGCACGCTGGTGCTTGCCGCCTTCGGCGACATGGACGTTTCCAAACTCACCGAGAAGCCGG CCGGCCGTAAGCCGATCCAGACGATCACCGTGCCGATGGAGCGGACAGGCGAAATCGTCGGGCGGCTGCAAAGCGCGCTT GCCGAGGGCAAGAAGGCCTACTGGATTTGCCCGCTGGTCGAAGAATCCGAAGAACTCGACCTGATGTCGGCCGAGGAGCG GCACGCCACGCTCGTTGCCGCGCTCGGCCCCGATATCGGCCTCATTCACGGCCGCATGAGCGGGCCGGAGAAGGATGCGG CGATGATGGCGTTCAAGAACGGCGAGACCCGCCTCCTCGTCGCCACCACCGTCGTCGAGGTCGGCGTCGACGTGCCGGAT GCGACGATCATGGTGATCGAACATGCCGAACGCTTCGGCCTGGCACAATTGCACCAGCTGCGCGGCCGCGTCGGGCGCGG CGACGAAGCCTCGACCTGCATCCTGCTCTACAAGGGGCCGCTCGGCGAAACCGGCCATGCCAGGCTTTCGATCATGCGCG AGACCGAAGATGGCTTCCGCATCGCCGAGGAAGACTTGAAACTGCGCGGTGAAGGCGAGCTGCTCGGCACGCGCCAGTCC GGTACGCCGGGCTTCCGCATCGCCAGCCTCGAGGCGCATGCCGACCTGCTTGAGATCGCCCGCAAGGATGCCGCTTATCT CATCGAGCGCGATCCTGAACTGACGAGTGAGAGAGGAACGGCGATCCGCACCCTGCTCTATCTCTTCCGTCGCGACGAGG CGATCCGGTTCTTAAGAGCTGGATAA
Upstream 100 bases:
>100_bases CCTGTCATGGCATTACCTTCCTGTTGATGCGCCTCTATAGACCCTGGAAAGCGGCTTGTCAGCCTTGCCAAGGCCGCATT GTTCATCGCATTTTGGCCGC
Downstream 100 bases:
>100_bases AGCGCGCCGCGGCGCGCTTTGGGCGACATGCATCAATCTGCCTTGGAAACCGCCACCGGCTTCGGCCGCGGCAGATGCTT CTGCTTCGGTTCGGGCGGCT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MRPAILDPLFSPISGLPGVGPKIAELLVKLLGRETPEDCRVIDLIFHAPFSLIDRRNQPGIARAPQGAIVTITARVDRHQ VPPRGKSNVPYRVFLHDETGELTLVFFRGQAAWLEKQLPVDAEVTVSGKVDWFNGRASMVHPDYIVRADEAENLPLVEPI YPLTAGLSPKTLRKIIDAALPRFPELPEWIDQALAQKQGLPTIRDSFHMLHEPRDPADIDAQAPARRRLAYDEFLAGQLS LSLVRQRLRKVAGQPVQATGEVSAKILKSLPFSLTSSQNEAIAEVLKDMAGTERMLRLLQGDVGSGKTLVALMAMAAVIE SGGQAVLMAPTEILARQHHATISKFAASAGLGIEILTGRTKGREREEILDRIASGAAQIIIGTHALFQDSVAYAKLMLAV VDEQHRFGVHQRLRLTAKGISPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTITVPMERTGEIVGRLQSAL AEGKKAYWICPLVEESEELDLMSAEERHATLVAALGPDIGLIHGRMSGPEKDAAMMAFKNGETRLLVATTVVEVGVDVPD ATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKGPLGETGHARLSIMRETEDGFRIAEEDLKLRGEGELLGTRQS GTPGFRIASLEAHADLLEIARKDAAYLIERDPELTSERGTAIRTLLYLFRRDEAIRFLRAG
Sequences:
>Translated_701_residues MRPAILDPLFSPISGLPGVGPKIAELLVKLLGRETPEDCRVIDLIFHAPFSLIDRRNQPGIARAPQGAIVTITARVDRHQ VPPRGKSNVPYRVFLHDETGELTLVFFRGQAAWLEKQLPVDAEVTVSGKVDWFNGRASMVHPDYIVRADEAENLPLVEPI YPLTAGLSPKTLRKIIDAALPRFPELPEWIDQALAQKQGLPTIRDSFHMLHEPRDPADIDAQAPARRRLAYDEFLAGQLS LSLVRQRLRKVAGQPVQATGEVSAKILKSLPFSLTSSQNEAIAEVLKDMAGTERMLRLLQGDVGSGKTLVALMAMAAVIE SGGQAVLMAPTEILARQHHATISKFAASAGLGIEILTGRTKGREREEILDRIASGAAQIIIGTHALFQDSVAYAKLMLAV VDEQHRFGVHQRLRLTAKGISPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTITVPMERTGEIVGRLQSAL AEGKKAYWICPLVEESEELDLMSAEERHATLVAALGPDIGLIHGRMSGPEKDAAMMAFKNGETRLLVATTVVEVGVDVPD ATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKGPLGETGHARLSIMRETEDGFRIAEEDLKLRGEGELLGTRQS GTPGFRIASLEAHADLLEIARKDAAYLIERDPELTSERGTAIRTLLYLFRRDEAIRFLRAG >Mature_701_residues MRPAILDPLFSPISGLPGVGPKIAELLVKLLGRETPEDCRVIDLIFHAPFSLIDRRNQPGIARAPQGAIVTITARVDRHQ VPPRGKSNVPYRVFLHDETGELTLVFFRGQAAWLEKQLPVDAEVTVSGKVDWFNGRASMVHPDYIVRADEAENLPLVEPI YPLTAGLSPKTLRKIIDAALPRFPELPEWIDQALAQKQGLPTIRDSFHMLHEPRDPADIDAQAPARRRLAYDEFLAGQLS LSLVRQRLRKVAGQPVQATGEVSAKILKSLPFSLTSSQNEAIAEVLKDMAGTERMLRLLQGDVGSGKTLVALMAMAAVIE SGGQAVLMAPTEILARQHHATISKFAASAGLGIEILTGRTKGREREEILDRIASGAAQIIIGTHALFQDSVAYAKLMLAV VDEQHRFGVHQRLRLTAKGISPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTITVPMERTGEIVGRLQSAL AEGKKAYWICPLVEESEELDLMSAEERHATLVAALGPDIGLIHGRMSGPEKDAAMMAFKNGETRLLVATTVVEVGVDVPD ATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKGPLGETGHARLSIMRETEDGFRIAEEDLKLRGEGELLGTRQS GTPGFRIASLEAHADLLEIARKDAAYLIERDPELTSERGTAIRTLLYLFRRDEAIRFLRAG
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=687, Percent_Identity=41.9213973799127, Blast_Score=475, Evalue=1e-135, Organism=Escherichia coli, GI1787357, Length=404, Percent_Identity=38.6138613861386, Blast_Score=233, Evalue=4e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 76726; Mature: 76726
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAILDPLFSPISGLPGVGPKIAELLVKLLGRETPEDCRVIDLIFHAPFSLIDRRNQPG CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHEEHHHHHCCHHHHHCCCCCC IARAPQGAIVTITARVDRHQVPPRGKSNVPYRVFLHDETGELTLVFFRGQAAWLEKQLPV CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHCCCC DAEVTVSGKVDWFNGRASMVHPDYIVRADEAENLPLVEPIYPLTAGLSPKTLRKIIDAAL CCEEEEECEEEEECCCCCEECCCEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHC PRFPELPEWIDQALAQKQGLPTIRDSFHMLHEPRDPADIDAQAPARRRLAYDEFLAGQLS CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LSLVRQRLRKVAGQPVQATGEVSAKILKSLPFSLTSSQNEAIAEVLKDMAGTERMLRLLQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GDVGSGKTLVALMAMAAVIESGGQAVLMAPTEILARQHHATISKFAASAGLGIEILTGRT CCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC KGREREEILDRIASGAAQIIIGTHALFQDSVAYAKLMLAVVDEQHRFGVHQRLRLTAKGI CCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCC SPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTITVPMERTGEIVGRLQSAL CCEEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHH AEGKKAYWICPLVEESEELDLMSAEERHATLVAALGPDIGLIHGRMSGPEKDAAMMAFKN HCCCCEEEEEECCCCCCCCCCCCCCCHHEEEEEECCCCEEEEECCCCCCCCCCEEEEEEC GETRLLVATTVVEVGVDVPDATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKGP CCEEEEEEEEEHHHCCCCCCCEEEEEECHHHCCHHHHHHHHCCCCCCCCCCEEEEEEECC LGETGHARLSIMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRIASLEAHADLLEIA CCCCCCCEEEEEEECCCCCEEEHHHHEECCCCCEEEECCCCCCCEEEEEEHHHHHHHHHH RKDAAYLIERDPELTSERGTAIRTLLYLFRRDEAIRFLRAG HHCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRPAILDPLFSPISGLPGVGPKIAELLVKLLGRETPEDCRVIDLIFHAPFSLIDRRNQPG CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHEEHHHHHCCHHHHHCCCCCC IARAPQGAIVTITARVDRHQVPPRGKSNVPYRVFLHDETGELTLVFFRGQAAWLEKQLPV CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHCCCC DAEVTVSGKVDWFNGRASMVHPDYIVRADEAENLPLVEPIYPLTAGLSPKTLRKIIDAAL CCEEEEECEEEEECCCCCEECCCEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHC PRFPELPEWIDQALAQKQGLPTIRDSFHMLHEPRDPADIDAQAPARRRLAYDEFLAGQLS CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LSLVRQRLRKVAGQPVQATGEVSAKILKSLPFSLTSSQNEAIAEVLKDMAGTERMLRLLQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GDVGSGKTLVALMAMAAVIESGGQAVLMAPTEILARQHHATISKFAASAGLGIEILTGRT CCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC KGREREEILDRIASGAAQIIIGTHALFQDSVAYAKLMLAVVDEQHRFGVHQRLRLTAKGI CCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCC SPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTITVPMERTGEIVGRLQSAL CCEEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHH AEGKKAYWICPLVEESEELDLMSAEERHATLVAALGPDIGLIHGRMSGPEKDAAMMAFKN HCCCCEEEEEECCCCCCCCCCCCCCCHHEEEEEECCCCEEEEECCCCCCCCCCEEEEEEC GETRLLVATTVVEVGVDVPDATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKGP CCEEEEEEEEEHHHCCCCCCCEEEEEECHHHCCHHHHHHHHCCCCCCCCCCEEEEEEECC LGETGHARLSIMRETEDGFRIAEEDLKLRGEGELLGTRQSGTPGFRIASLEAHADLLEIA CCCCCCCEEEEEEECCCCCEEEHHHHEECCCCCEEEECCCCCCCEEEEEEHHHHHHHHHH RKDAAYLIERDPELTSERGTAIRTLLYLFRRDEAIRFLRAG HHCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]