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The map label for this gene is codA [H]

Identifier: 209549272

GI number: 209549272

Start: 1704838

End: 1706151

Strand: Reverse

Name: codA [H]

Synonym: Rleg2_1675

Alternate gene names: 209549272

Gene position: 1706151-1704838 (Counterclockwise)

Preceding gene: 209549273

Following gene: 209549271

Centisome position: 37.6

GC content: 65.14

Gene sequence:

>1314_bases
ATGACCCATTCCTTCCTTTCCCCGCCCAATGCCGGCCGCTTCGTGCTGAGCAATGCAACGCTGCCTGCCGTCGCTGTCGA
GGGATTTGACGCGCCGGCCACCGAGGGGCTGGTCAAGGCGGATATCGTCATCGCCGATGGCGTGATCTCCACGCTGCTGC
CGGCGGGTGCCGCGCCGGTGGAATTGCCAAGATCCGATCTGAAGGATGGCATGGTCTGGCCCTGCTTCACCGATATGCAC
ACCCATCTCGACAAGGGGCATATCTGGCCTCGCAACGCCAATCCCGACGGCACCTTCATCGGCGCCCTGGACGCAGTGCG
GGCCGACCGGGAGGCGTACTGGTCGGCGGCGGATGTCAGCAAGCGCATGGAATTCTCGCTGCGCTCGGCCTATGCGCACG
GGACCAGCCTGATCCGCACGCATCTCGATTCGCTGGCGCCGCAGCACCGTATTTCCTTCGAGGTTTTTGCCGAGATGCGC
GAGGCCTGGAAAGACCGGATCGCGCTGCAGGCGGTGGCGCTCTTCCCGCTGGAAAATATGGTGGACGCGACCTATTTCGC
CGACCTGGTCGCCGTCGTCCGCGAAAAAGGCGGGCTGATCGGCGGCGTCACCCGGATGACCGCCGATCTCGACAGCCAGC
TCGATGTACTTTTCAGGGCCGCCGCCGATAACGGCCTCGACGTCGATCTTCATGTCGACGAGAGCGACGATCCCGCCGCC
GAGACGCTGAAGGCGATCGCGCAAGCCGTGCTGCGCAACCGGTTCGACGGCAAGGTGACGGCAGGCCATTGCTGCTCGCT
CGCCAGGCAGGACGAGGAGACGGCAAAACGCGCGGTCGAGCTCGTCGCGAAAGCTGGCATCTCCATCGTCTCGCTGCCGA
TGTGCAACCTCTATCTACAGGACCGCTATCCCGGCCGAACGCCTCGCTGGCGCGGCGTCACCCTGTTCAAGGAACTGGCG
GCGGCCGGCGTTGCGACGGCAGTTTCCTCCGACAACACGCGTGATCCCTTTTATGCCTATGGCGATCTCGACCCGGTCGA
GGTGTTGCGCGAGGCGGTGCGCATTCTGCATCTCGATCACCCGCTGGATACGGCCGCGCGCGTCGTTACCACCTCGCCTG
CGGATATTCTCGGCCGGCCCGACAAGGGGCGCATCGCCGTCGGCGCCCTGGCCGACCTCGTGCTCTTCAGCGCCCGGCGC
TGGAGCGAATTTCTTTCCCGTCCGCAGTCTGACCGCGTCGTGCTTCGCCGCGGCAAGGTGATCGACCGCAGCCTGCCGGA
CTATCGTGAACTCGACAGCGTCGTTGGAGCATGA

Upstream 100 bases:

>100_bases
TGCTTTCCCTGCTTGGCGTCGCAATCTTCGCCGTCACCTCGTTCATTTCCTGGCTCGCCCTGCACCGTTGGCATGAGAGC
AGCCTGAAACGGGAAAACTG

Downstream 100 bases:

>100_bases
CATGCCGGATTATCAGACGATCAAAACGCAACTCGAAGGCATTGCCGTCGAGGACAATCCGGCGCTGGTGCGCCAGAAGA
GCCGCGATTTTTACTGGTAT

Product: cytosine deaminase-like protein

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MTHSFLSPPNAGRFVLSNATLPAVAVEGFDAPATEGLVKADIVIADGVISTLLPAGAAPVELPRSDLKDGMVWPCFTDMH
THLDKGHIWPRNANPDGTFIGALDAVRADREAYWSAADVSKRMEFSLRSAYAHGTSLIRTHLDSLAPQHRISFEVFAEMR
EAWKDRIALQAVALFPLENMVDATYFADLVAVVREKGGLIGGVTRMTADLDSQLDVLFRAAADNGLDVDLHVDESDDPAA
ETLKAIAQAVLRNRFDGKVTAGHCCSLARQDEETAKRAVELVAKAGISIVSLPMCNLYLQDRYPGRTPRWRGVTLFKELA
AAGVATAVSSDNTRDPFYAYGDLDPVEVLREAVRILHLDHPLDTAARVVTTSPADILGRPDKGRIAVGALADLVLFSARR
WSEFLSRPQSDRVVLRRGKVIDRSLPDYRELDSVVGA

Sequences:

>Translated_437_residues
MTHSFLSPPNAGRFVLSNATLPAVAVEGFDAPATEGLVKADIVIADGVISTLLPAGAAPVELPRSDLKDGMVWPCFTDMH
THLDKGHIWPRNANPDGTFIGALDAVRADREAYWSAADVSKRMEFSLRSAYAHGTSLIRTHLDSLAPQHRISFEVFAEMR
EAWKDRIALQAVALFPLENMVDATYFADLVAVVREKGGLIGGVTRMTADLDSQLDVLFRAAADNGLDVDLHVDESDDPAA
ETLKAIAQAVLRNRFDGKVTAGHCCSLARQDEETAKRAVELVAKAGISIVSLPMCNLYLQDRYPGRTPRWRGVTLFKELA
AAGVATAVSSDNTRDPFYAYGDLDPVEVLREAVRILHLDHPLDTAARVVTTSPADILGRPDKGRIAVGALADLVLFSARR
WSEFLSRPQSDRVVLRRGKVIDRSLPDYRELDSVVGA
>Mature_436_residues
THSFLSPPNAGRFVLSNATLPAVAVEGFDAPATEGLVKADIVIADGVISTLLPAGAAPVELPRSDLKDGMVWPCFTDMHT
HLDKGHIWPRNANPDGTFIGALDAVRADREAYWSAADVSKRMEFSLRSAYAHGTSLIRTHLDSLAPQHRISFEVFAEMRE
AWKDRIALQAVALFPLENMVDATYFADLVAVVREKGGLIGGVTRMTADLDSQLDVLFRAAADNGLDVDLHVDESDDPAAE
TLKAIAQAVLRNRFDGKVTAGHCCSLARQDEETAKRAVELVAKAGISIVSLPMCNLYLQDRYPGRTPRWRGVTLFKELAA
AGVATAVSSDNTRDPFYAYGDLDPVEVLREAVRILHLDHPLDTAARVVTTSPADILGRPDKGRIAVGALADLVLFSARRW
SEFLSRPQSDRVVLRRGKVIDRSLPDYRELDSVVGA

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=403, Percent_Identity=27.0471464019851, Blast_Score=125, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 47603; Mature: 47471

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00134 TRYPSIN_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSFLSPPNAGRFVLSNATLPAVAVEGFDAPATEGLVKADIVIADGVISTLLPAGAAPV
CCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEECHHHHHHHCCCCCCC
ELPRSDLKDGMVWPCFTDMHTHLDKGHIWPRNANPDGTFIGALDAVRADREAYWSAADVS
CCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
KRMEFSLRSAYAHGTSLIRTHLDSLAPQHRISFEVFAEMREAWKDRIALQAVALFPLENM
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VDATYFADLVAVVREKGGLIGGVTRMTADLDSQLDVLFRAAADNGLDVDLHVDESDDPAA
HHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
ETLKAIAQAVLRNRFDGKVTAGHCCSLARQDEETAKRAVELVAKAGISIVSLPMCNLYLQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEHHHHEEEE
DRYPGRTPRWRGVTLFKELAAAGVATAVSSDNTRDPFYAYGDLDPVEVLREAVRILHLDH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
PLDTAARVVTTSPADILGRPDKGRIAVGALADLVLFSARRWSEFLSRPQSDRVVLRRGKV
CHHHHHHEEECCCHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCH
IDRSLPDYRELDSVVGA
HHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
THSFLSPPNAGRFVLSNATLPAVAVEGFDAPATEGLVKADIVIADGVISTLLPAGAAPV
CCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEECHHHHHHHCCCCCCC
ELPRSDLKDGMVWPCFTDMHTHLDKGHIWPRNANPDGTFIGALDAVRADREAYWSAADVS
CCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
KRMEFSLRSAYAHGTSLIRTHLDSLAPQHRISFEVFAEMREAWKDRIALQAVALFPLENM
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VDATYFADLVAVVREKGGLIGGVTRMTADLDSQLDVLFRAAADNGLDVDLHVDESDDPAA
HHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
ETLKAIAQAVLRNRFDGKVTAGHCCSLARQDEETAKRAVELVAKAGISIVSLPMCNLYLQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEHHHHEEEE
DRYPGRTPRWRGVTLFKELAAAGVATAVSSDNTRDPFYAYGDLDPVEVLREAVRILHLDH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
PLDTAARVVTTSPADILGRPDKGRIAVGALADLVLFSARRWSEFLSRPQSDRVVLRRGKV
CHHHHHHEEECCCHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCH
IDRSLPDYRELDSVVGA
HHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]