| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is gudP [H]
Identifier: 209400750
GI number: 209400750
Start: 3747545
End: 3748897
Strand: Reverse
Name: gudP [H]
Synonym: ECH74115_4050
Alternate gene names: 209400750
Gene position: 3748897-3747545 (Counterclockwise)
Preceding gene: 209398965
Following gene: 209397778
Centisome position: 67.28
GC content: 52.03
Gene sequence:
>1353_bases ATGAGTTCTTTAAGTCAGGCTGCGAGCAGTGTGGAAAAACGCACGAATGCTCGTTACTGGATAGTGGTGATGTTGTTTAT CGTCACATCCTTCAACTACGGCGACCGCGCTACGCTTTCTATTGCCGGTTCGGAAATGGCCAAAGATATCGGCCTTGATC CCGTGGGAATGGGCTATGTGTTCTCTGCCTTCTCATGGGCTTATGTTATCGGGCAGATCCCTGGTGGTTGGTTGCTGGAT CGTTTTGGTTCAAAACGCGTCTACTTCTGGTCGATCTTTATCTGGTCGATGTTTACCTTGCTGCAAGGCTTCGTCGATAT CTTTAGTGGATTCGGCATTATCGTTGCCCTGTTTACTCTGCGCTTCCTGGTCGGGCTTGCTGAAGCGCCATCTTTCCCCG GCAACAGTCGCATTGTTGCGGCCTGGTTTCCGGCGCAGGAAAGGGGAACGGCGGTGTCGATTTTTAACTCCGCTCAATAC TTCGCAACGGTGATCTTCGCGCCGATTATGGGCTGGCTGACGCATGAAGTGGGCTGGTCACACGTCTTCTTCTTTATGGG CGGTCTGGGCATTGCCATCAGCTTTATCTGGTTGAAAGTCATCCACGAGCCAAATCAACATCCGGGGGTAAATCAGAAAG AGCTGGAGTACATCGCCGCGGGTGGCGCGCTGATCAATATGGATCAGCAAAACACCAAAGTTAAAGTGCCGTTCAGCGTG AAGTGGGGGCAGATCAAACAACTGCTCGGGTCACGGATGATGATCGGCGTTTATATCGGTCAGTACTGTATCAACGCCCT GACTTACTTTTTCATTACCTGGTTTCCGGTTTATCTGGTGCAGGCGCGTGGGATGTCGATTCTGAAAGCGGGCTTTGTGG CTTCCGTTCCGGCGGTTTGTGGTTTTATCGGTGGTGTGCTGGGTGGGATTATTTCCGACTGGCTGATGCGCCGCACGGGA TCGCTGAACATTGCGCGTAAAACACCGATCGTAATGGGCATGTTGCTGTCGATGGTGATGGTGTTCTGCAACTACGTCAA CGTTGAGTGGATGATCATCGGCTTTATGGCGCTGGCCTTCTTCGGTAAGGGCATTGGGGCGCTGGGTTGGGCAGTAATGG CAGATACCGCGCCAAAAGAGATCAGCGGTCTTTCCGGTGGCCTGTTCAACATGTTCGGTAACATTTCTGGCATCGTCACG CCAATCGCAATTGGTTATATCGTTGGCACGACTGGCTCGTTTAATGGGGCGCTGATTTATGTTGGTGTTCATGCCTTAAT CGCGGTACTGAGCTACCTGGTGCTGGTGGGCGATATCAAGCGTATCGAGCTGAAACCTGTCGTGGGGCAATAA
Upstream 100 bases:
>100_bases CTATAAAAACGGCAAAAAACACCCTACGTCACCTCTGATTTCCTGGCGATGTCGCAGTCCAGAGTGAGCGTGGCTAACGC GAATTTTCAGGAGTGCAACA
Downstream 100 bases:
>100_bases GATGACGACACAATCCAGTCCTGTTATTACTGATATGAAAGTCATTCCGGTCGCCGGGTACGACAGCATGTTGCTTAATA TTGGTGGGGCGCATAACGCA
Product: glucarate permease
Products: NA
Alternate protein names: D-glucarate permease [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLD RFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQY FATVIFAPIMGWLTHEVGWSHVFFFMGGLGIAISFIWLKVIHEPNQHPGVNQKELEYIAAGGALINMDQQNTKVKVPFSV KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTG SLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVT PIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELKPVVGQ
Sequences:
>Translated_450_residues MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLD RFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQY FATVIFAPIMGWLTHEVGWSHVFFFMGGLGIAISFIWLKVIHEPNQHPGVNQKELEYIAAGGALINMDQQNTKVKVPFSV KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTG SLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVT PIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELKPVVGQ >Mature_449_residues SSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDR FGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYF ATVIFAPIMGWLTHEVGWSHVFFFMGGLGIAISFIWLKVIHEPNQHPGVNQKELEYIAAGGALINMDQQNTKVKVPFSVK WGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGS LNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTP IAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELKPVVGQ
Specific function: Uptake of D-glucarate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI9966811, Length=409, Percent_Identity=27.3838630806846, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI9945322, Length=409, Percent_Identity=28.1173594132029, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI21322234, Length=413, Percent_Identity=25.6658595641646, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI4885441, Length=379, Percent_Identity=26.1213720316623, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI148743791, Length=395, Percent_Identity=25.0632911392405, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI6912666, Length=371, Percent_Identity=25.8760107816712, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI5031955, Length=269, Percent_Identity=25.6505576208178, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI154350196, Length=421, Percent_Identity=23.5154394299287, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI148728191, Length=306, Percent_Identity=24.5098039215686, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI256219598, Length=379, Percent_Identity=23.2189973614776, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI4503847, Length=379, Percent_Identity=23.2189973614776, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI256219483, Length=379, Percent_Identity=23.2189973614776, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI223718438, Length=218, Percent_Identity=27.5229357798165, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI256219543, Length=295, Percent_Identity=24.7457627118644, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI256219564, Length=309, Percent_Identity=22.6537216828479, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI154800443, Length=294, Percent_Identity=23.469387755102, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1789152, Length=450, Percent_Identity=99.3333333333333, Blast_Score=893, Evalue=0.0, Organism=Escherichia coli, GI1789515, Length=434, Percent_Identity=57.3732718894009, Blast_Score=537, Evalue=1e-154, Organism=Escherichia coli, GI87082320, Length=435, Percent_Identity=42.2988505747126, Blast_Score=353, Evalue=1e-98, Organism=Escherichia coli, GI2367379, Length=419, Percent_Identity=28.8782816229117, Blast_Score=165, Evalue=7e-42, Organism=Escherichia coli, GI2367193, Length=435, Percent_Identity=23.2183908045977, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788573, Length=452, Percent_Identity=22.3451327433628, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533556, Length=433, Percent_Identity=28.4064665127021, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI115533554, Length=431, Percent_Identity=27.6102088167053, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17552542, Length=414, Percent_Identity=24.8792270531401, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71991448, Length=375, Percent_Identity=24, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71991453, Length=375, Percent_Identity=24, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17535049, Length=433, Percent_Identity=22.4018475750577, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17560030, Length=400, Percent_Identity=24.5, Blast_Score=88, Evalue=7e-18, Organism=Caenorhabditis elegans, GI193205400, Length=302, Percent_Identity=22.8476821192053, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17569727, Length=384, Percent_Identity=24.21875, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI32565916, Length=256, Percent_Identity=24.21875, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI32565914, Length=362, Percent_Identity=22.9281767955801, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17554148, Length=355, Percent_Identity=23.3802816901408, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25145964, Length=286, Percent_Identity=22.3776223776224, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17532009, Length=416, Percent_Identity=21.875, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71997452, Length=320, Percent_Identity=20.625, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25151055, Length=242, Percent_Identity=21.900826446281, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71989129, Length=263, Percent_Identity=25.0950570342205, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17509575, Length=236, Percent_Identity=25.8474576271186, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115534558, Length=248, Percent_Identity=25, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45550460, Length=423, Percent_Identity=25.7683215130024, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI24641682, Length=383, Percent_Identity=25.8485639686684, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24655255, Length=361, Percent_Identity=27.1468144044321, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24583789, Length=405, Percent_Identity=25.4320987654321, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24639764, Length=429, Percent_Identity=22.6107226107226, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI20130167, Length=426, Percent_Identity=26.7605633802817, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI20130135, Length=407, Percent_Identity=25.3071253071253, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI24655271, Length=407, Percent_Identity=25.0614250614251, Blast_Score=105, Evalue=8e-23, Organism=Drosophila melanogaster, GI24654215, Length=449, Percent_Identity=24.4988864142539, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI19922400, Length=433, Percent_Identity=24.7113163972286, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24648416, Length=461, Percent_Identity=24.295010845987, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI21356189, Length=461, Percent_Identity=24.295010845987, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24584153, Length=399, Percent_Identity=25.062656641604, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573708, Length=432, Percent_Identity=22.9166666666667, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI28573707, Length=432, Percent_Identity=22.9166666666667, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI62484226, Length=407, Percent_Identity=25.7985257985258, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI28573299, Length=408, Percent_Identity=25, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24580790, Length=389, Percent_Identity=23.9074550128535, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI20129235, Length=375, Percent_Identity=27.2, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24658674, Length=359, Percent_Identity=25.3481894150418, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24658666, Length=407, Percent_Identity=23.5872235872236, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI221474708, Length=164, Percent_Identity=32.3170731707317, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24653727, Length=367, Percent_Identity=23.7057220708447, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI45550495, Length=363, Percent_Identity=23.1404958677686, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI281361682, Length=361, Percent_Identity=22.4376731301939, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24658658, Length=409, Percent_Identity=21.760391198044, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49143; Mature: 49012
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYV CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCCHHHH FSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTL HHHHHHHHHHHCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWS HHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHH HVFFFMGGLGIAISFIWLKVIHEPNQHPGVNQKELEYIAAGGALINMDQQNTKVKVPFSV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEEEC KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVC CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAF HHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIY HHCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHEECCCCCCCEEEH VGVHALIAVLSYLVLVGDIKRIELKPVVGQ HHHHHHHHHHHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure SSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYV CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCCHHHH FSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTL HHHHHHHHHHHCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWS HHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHH HVFFFMGGLGIAISFIWLKVIHEPNQHPGVNQKELEYIAAGGALINMDQQNTKVKVPFSV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEEEC KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVC CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAF HHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIY HHCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHEECCCCCCCEEEH VGVHALIAVLSYLVLVGDIKRIELKPVVGQ HHHHHHHHHHHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 9772162; 10762278 [H]