| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ycaI [H]
Identifier: 209400423
GI number: 209400423
Start: 1097318
End: 1099582
Strand: Direct
Name: ycaI [H]
Synonym: ECH74115_1074
Alternate gene names: 209400423
Gene position: 1097318-1099582 (Clockwise)
Preceding gene: 209396562
Following gene: 209398481
Centisome position: 19.69
GC content: 49.67
Gene sequence:
>2265_bases ATGAAAATAACGACAGTCGGCGTATGCATAATTTGCGGAATTTTTCCGTTGCTGATTTTGCCCCAATTGCCTGGGACATT AACCCTTGCGTTTCTGACTCTCTTCGCCTGCGTACTGGCATTTATCCCTGTTAAAACCGTCCGTTATATCGCGCTGACGT TGCTGTTTTTCGTTTGGGGCATATTATCAGCAAAGCAAATTTTGTTGGCAGGAGAAACCTTAACTGGCGCGACGCAGGAT GCAATTGTTGAGATCACTGCTACTGACGGCATGACCACTCATTACGGTCAAATTACTTATCTACAAGGTCAACGTATATT CCCTGCGCCAGGCCTTGTGCTGTATGGCGAATATCTTCCGCAAGCGGTTTGTGCCGGACAACTGTGGTCAATGAAACTCA AAGTTCGTGCCGTTCATGGTCAACTTAATGATGGCGGCTTTGATAGCCAGCGTTATGCCATTGCCCAGCATCAGCCGCTC ACCGGCCGCTTTCTGCAGGCAAGTGTTATTGAACCGAATTGTAGCCTGCGTGCACAGTATCTGGCGTCACTACAAACAAC GCTGCAACCCTATCCGTGGAATGCGGTTATTCTTGGTTTAGGTATGGGGGAACGGTTATCCGTCCCTAAAGAAATCAAAA ATATCATGCGTGATACTGGAACGGCGCATTTAATGGCGATATCGGGATTGCACATCGCTTTTGCGGCGTTGCTGGCTGCC GGACTCATTCGCAGTGGACAAATTTTTCTGCCTGGGCGCTGGATCCACTGGCAAATGCCATTAATTGGCGGAATCTGCTG TGCTGCTTTTTATGCCTGGCTGACGGGAATGCAACCTCCTGCATTGCGTACCGTTGTGGCGCTTGCTACGTGGGGTATGC TTAAGTTAAGTGGGCGACAGTGGAGTGGCTGGGATGTATGGATATGTTGTCTGGCGGCAATTTTGCTGATGGATCCTGTT GTCATTCTCTCGCAAAGTTTATGGCTCTCTGCCGCTGCGGTCGCGGCATTGATATTTTGGTATCAGTGGTTTCCCTGTCC TGAGTGGCAACTGCCGCCGGTATTGCGTGCAGTTGTTTCCCTCATCCATCTGCAACTGGGAATCACACTTCTGCTTATGC CCGTGCAAATCGTCATTTTTCATGGCATTAGTCTGACCTCGTTTATTGCAAATCTATTAGCAATTCCCTTGGTGACATTT ATCACGGTTCCGTTGATCCTCGCCGCGATGGTTGTGCATTTAAGCGGGCCGTTAATCCTGGATCAAGGGTTATGGTTTCT TGCCGACCGGTCTTTGGCTTTACTTTTCTTGGGGTTAAAGAGTTTGCCAGAAGGGTGGATCAACATTGCTGAACGTTGGC AATGGCTATCATTTTCCCCATGGTTCTTACTGGTGGTATGGCGATTAAACGCCTGGCGAACGTTGCCAGCAATGTGTGTG GCTGTAGGCTTGCTGATGTGCTGGCCGCTGTGGCAAAAACCTCGACCTGACGAGTGGCAAGTGTACATGCTTGATGTCGG GCAAGGGCTGGCAATGGTGATAGCCAGAAACGGCAAAGCGATTCTCTATGACACGGGACTGGCCTGGCCTGAAGGGGATA GTGGGCAACAACTGATTATCCCCTGGCTCCACTGGCATAATCTTGAACCGGAAGGCGTTATCCTGAGTCATGAACATCTG GATCACCGGGGAGGGCTGGACTCAATATTGCATACATGGCCGATGTTATGGATCAGAAGTCCGTTAAACTGGGAACATCA TCAGCCCTGTGTGCGTGGCGAAGCGTGGCAATGGCAAGGATTGCGTTTCAGCGCGCACTGGCCTTTACAAGGTCGCAACG ATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCC CCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGTGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAA TACCTCATCATCATTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGC GACTGCCCTCTAACAAAGTTAAGCATCGCTATCAACAACAAGGTTATACGTGGCTTGATACTCCTCATCAGGGGCAAGTA ACGGTCGATTTTTCAGCGCAAGGCTGGCGGATTAGCAGCCTCAGGGAGCAAATTTTACCTCGTTGGTATCATCAGTGGTT TGGCGTGCCAGTGGATAACGGGTAG
Upstream 100 bases:
>100_bases CTTTCGTTAAATTCTTCTGAATGTGCCTCGGGGAACGCAAAATTCCCACCAGACAACCGCTCAACAAAGTTGCACACTTT CCATAAACAGGGAGGGGTGC
Downstream 100 bases:
>100_bases AATATGCGGCTATTTCAACAAATGCTGGTTTTTTGAATGCATAACGACAAAGATCTCTCTACGTGGCAGACATTCCGCCG ACTGTGGCCAACCATTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILSAKQILLAGETLTGATQD AIVEITATDGMTTHYGQITYLQGQRIFPAPGLVLYGEYLPQAVCAGQLWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL TGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA GLIRSGQIFLPGRWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPV VILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTF ITVPLILAAMVVHLSGPLILDQGLWFLADRSLALLFLGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCV AVGLLMCWPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHL DHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGRNDKGNNHSCVVKVDDGTNSILLTGDIEA PAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQQQGYTWLDTPHQGQV TVDFSAQGWRISSLREQILPRWYHQWFGVPVDNG
Sequences:
>Translated_754_residues MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILSAKQILLAGETLTGATQD AIVEITATDGMTTHYGQITYLQGQRIFPAPGLVLYGEYLPQAVCAGQLWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL TGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA GLIRSGQIFLPGRWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPV VILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTF ITVPLILAAMVVHLSGPLILDQGLWFLADRSLALLFLGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCV AVGLLMCWPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHL DHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGRNDKGNNHSCVVKVDDGTNSILLTGDIEA PAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQQQGYTWLDTPHQGQV TVDFSAQGWRISSLREQILPRWYHQWFGVPVDNG >Mature_754_residues MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILSAKQILLAGETLTGATQD AIVEITATDGMTTHYGQITYLQGQRIFPAPGLVLYGEYLPQAVCAGQLWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL TGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA GLIRSGQIFLPGRWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPV VILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTF ITVPLILAAMVVHLSGPLILDQGLWFLADRSLALLFLGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCV AVGLLMCWPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHL DHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGRNDKGNNHSCVVKVDDGTNSILLTGDIEA PAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQQQGYTWLDTPHQGQV TVDFSAQGWRISSLREQILPRWYHQWFGVPVDNG
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ComEC, N.gonorrhoeae ComA, and H.influenzae Rec2 [H]
Homologues:
Organism=Escherichia coli, GI87081801, Length=754, Percent_Identity=97.0822281167109, Blast_Score=1452, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 84445; Mature: 84445
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWG CCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSAKQILLAGETLTGATQDAIVEITATDGMTTHYGQITYLQGQRIFPAPGLVLYGEYLP HHHHHHHEEECCCCCCCCCCEEEEEEECCCCEEECCEEEEEECCEECCCCCEEEEHHHHH QAVCAGQLWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQY HHHHCCCHHEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHH LASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA HHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH GLIRSGQIFLPGRWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALATWGMLKLSGRQ HHHCCCCEEECCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCC WSGWDVWICCLAAILLMDPVVILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVS CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLIL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE DQGLWFLADRSLALLFLGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCV ECCCCEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHH AVGLLMCWPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLII HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCEEEE PWLHWHNLEPEGVILSHEHLDHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQG EEHHHCCCCCCCEEEECHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC LRFSAHWPLQGRNDKGNNHSCVVKVDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQ EEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH VPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQQQGYTWLDTPHQGQV CCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEECCCCHHHHHHHHHCCCEEECCCCCCEE TVDFSAQGWRISSLREQILPRWYHQWFGVPVDNG EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWG CCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSAKQILLAGETLTGATQDAIVEITATDGMTTHYGQITYLQGQRIFPAPGLVLYGEYLP HHHHHHHEEECCCCCCCCCCEEEEEEECCCCEEECCEEEEEECCEECCCCCEEEEHHHHH QAVCAGQLWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQY HHHHCCCHHEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHH LASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA HHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH GLIRSGQIFLPGRWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALATWGMLKLSGRQ HHHCCCCEEECCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCC WSGWDVWICCLAAILLMDPVVILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVS CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLIL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE DQGLWFLADRSLALLFLGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCV ECCCCEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHH AVGLLMCWPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLII HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCEEEE PWLHWHNLEPEGVILSHEHLDHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQG EEHHHCCCCCCCEEEECHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC LRFSAHWPLQGRNDKGNNHSCVVKVDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQ EEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH VPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQQQGYTWLDTPHQGQV CCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEECCCCHHHHHHHHHCCCEEECCCCCCEE TVDFSAQGWRISSLREQILPRWYHQWFGVPVDNG EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8094880 [H]