Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is yeeV [H]
Identifier: 209400366
GI number: 209400366
Start: 4686910
End: 4687284
Strand: Direct
Name: yeeV [H]
Synonym: ECH74115_5036
Alternate gene names: 209400366
Gene position: 4686910-4687284 (Clockwise)
Preceding gene: 209399834
Following gene: 209398605
Centisome position: 84.11
GC content: 54.4
Gene sequence:
>375_bases ATGAAAACATTACCCGATACACACGTACGGGAGGCATCGCGCTGCCCGTCTCCCATCACCATCTGGCAGACACTGCTTGG CCGTCTGCTGGACCAGCACTACGGCCTCACGCTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG AGGCAGGTATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGTGCTGGTGCGTACCGACCAGCCGGGATTC AGCGCCTGTACCCGCTCTCAGTTAATAAACAGCATCGATATCCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGCGA CAATTACAGAACGGTAAATAACATTACCCTGGGTAAGCATCCGGAGGCGAAATGA
Upstream 100 bases:
>100_bases CGAAAAAGTAAATCATCAGAATAACCTTCTGCTCCGGCCTGGTGTTTTCACCACGCCACTTCCCCATTTCTCATCTCTGC ATATCAGGAAAAACTTTAGT
Downstream 100 bases:
>100_bases TGAAACTGGCCCTGACACTGGAAGCCGACAGCGTTAACGTACAGGCACTGAATATGGGGCGAATTGTCGTTGACATTGAT GGTGTTAATCTCGCTGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKTLPDTHVREASRCPSPITIWQTLLGRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYVLVRTDQPGF SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPEAK
Sequences:
>Translated_124_residues MKTLPDTHVREASRCPSPITIWQTLLGRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYVLVRTDQPGF SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPEAK >Mature_124_residues MKTLPDTHVREASRCPSPITIWQTLLGRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYVLVRTDQPGF SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ypjF and ykfI [H]
Homologues:
Organism=Escherichia coli, GI1788315, Length=124, Percent_Identity=88.7096774193548, Blast_Score=227, Evalue=2e-61, Organism=Escherichia coli, GI1788999, Length=104, Percent_Identity=64.4230769230769, Blast_Score=140, Evalue=3e-35, Organism=Escherichia coli, GI1786439, Length=110, Percent_Identity=60, Blast_Score=135, Evalue=9e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009610 [H]
Pfam domain/function: PF06755 DUF1219 [H]
EC number: NA
Molecular weight: Translated: 14033; Mature: 14033
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLPDTHVREASRCPSPITIWQTLLGRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH DAVNFLVEKYVLVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKH HHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PEAK CCCC >Mature Secondary Structure MKTLPDTHVREASRCPSPITIWQTLLGRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH DAVNFLVEKYVLVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKH HHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PEAK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]