| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is traR [C]
Identifier: 209400322
GI number: 209400322
Start: 2836006
End: 2836230
Strand: Reverse
Name: traR [C]
Synonym: ECH74115_3060
Alternate gene names: 209400322
Gene position: 2836230-2836006 (Counterclockwise)
Preceding gene: 209397528
Following gene: 209400847
Centisome position: 50.9
GC content: 52.0
Gene sequence:
>225_bases ATGCCGGACAACGTAGATTTTATTCAGGAACAACAGGCTGAATTACTGGAGCGCCAGATTAACGCGGCAAGGGTAAAACA TTGCGGTGCTTCTGCGCTGGTTTGCGAAGAGTGTGACGCGCCAATACCTGCTGCCCGTCGTGCGGCTTACCCGTCAGCCA CGCGTTGTGTTTCCTGTCAGTCAGTCTTTGAAGCAAAAAACAAACGTTACCGGAGAACGGCATGA
Upstream 100 bases:
>100_bases AGCAAATTTCCTCAGTGGATGAACTGACAAAATTAACGACAGAACTTGCCAGTTATTGCGCTGATGTATCCAGGAAACTT AACGATAAAAGGAGCTGATA
Downstream 100 bases:
>100_bases GTATTCGTATTGAAATTGGCGAACGTTATGTCGTTACCAGTGACAGCTTTCAGTTTATTCTCCACGAGAAAAAGAGAGCG GAAAGCGGTAAAAACGCCGG
Product: C4-type zinc finger protein, DksA/TraR family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MPDNVDFIQEQQAELLERQINAARVKHCGASALVCEECDAPIPAARRAAYPSATRCVSCQSVFEAKNKRYRRTA
Sequences:
>Translated_74_residues MPDNVDFIQEQQAELLERQINAARVKHCGASALVCEECDAPIPAARRAAYPSATRCVSCQSVFEAKNKRYRRTA >Mature_73_residues PDNVDFIQEQQAELLERQINAARVKHCGASALVCEECDAPIPAARRAAYPSATRCVSCQSVFEAKNKRYRRTA
Specific function: Unknown. [C]
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8254; Mature: 8123
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNVDFIQEQQAELLERQINAARVKHCGASALVCEECDAPIPAARRAAYPSATRCVSCQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHCCCCHHHHHHHH SVFEAKNKRYRRTA HHHHHHHHHHCCCC >Mature Secondary Structure PDNVDFIQEQQAELLERQINAARVKHCGASALVCEECDAPIPAARRAAYPSATRCVSCQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHCCCCHHHHHHHH SVFEAKNKRYRRTA HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA