| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209400295
Identifier: 209400295
GI number: 209400295
Start: 1518118
End: 1518996
Strand: Direct
Name: 209400295
Synonym: ECH74115_1555
Alternate gene names: NA
Gene position: 1518118-1518996 (Clockwise)
Preceding gene: 209400306
Following gene: 209399408
Centisome position: 27.25
GC content: 44.25
Gene sequence:
>879_bases ATGAAAAGTATAGCAAAGGCACAAAACGATTTCACTATCTTCAAATTCGGCGACAGTGAAATCCGCGTCATCAACAAGTG CGGTGAGCCGTGGTTTGTAGCTAAAGATGTTTGTGATGCTTTAGCTTTGACTAACTCACGCAAGGCGCTTACTGCACTTG ATGACGATGAAAAGGGAGTAACTTTAAGTTACACCCTTGGTGGTGAGCAGAATCTAAGCATTGTGAGCGAATCAGGTATG TATACATTGGTTCTGCGCTGCCGCGATGCAGTCAATAAAGGTTCAGTCCCGCACAAATTCCGCAAGTGGGTAACAGCAGA AGTTCTGCCTTCAATTCGCAAACATGGCGAGTATGTAAAAGGAAAGAAAACCACTGTTGAGGAAAGAACACCGCTACGCG ATGCAGTAAACATGCTGGTAGGAAAGAAAGGACTTCGCAATGACGATGCATACAATATGGTTCATCAGCGTTTTGGTATT GACAGCATTGATGAGCTTTCAATTGAACAAATCCCGCTTGCCGTAGAGTACATCCACAGGGTAGTGCTTGAAGGTGAATT CATTGGCAAACAAGAGAAGAGCACCAACGAGCTTTCCGCAAAAGAAGCAAACAGCCTTGTATGGCTATGGGATTATGCCA ACCGCTCACAGGCATTATTCCGCGAACTGTATCCGGCGCTAAAACAAATTCAATCGAACTATTCCGGCAGATGCTACGAC TACGGTCATGAGTTCTCGTATGTTATTGGAATGGCGAGAGACGTTTTAATTAATCACACACGAGATGTTGATATCAATGA GCCAGACGGACCAACGAATCTTTCCGCATGGATGAGACTTAAGAATAAAGAATTACCTCCTTCACCGCATCACTACTAA
Upstream 100 bases:
>100_bases ACGAAGGGAAAGATATAACTGATAGAGCAGAAAGTTGAAGCCCCAACTGCTGTAACAGTCAGGGCTTCGTTATCAACAAA TCGGCTTAGGAAATATTGAC
Downstream 100 bases:
>100_bases CAGATTGCCAACGAAATGACCCAGCTTCGGCTGGGTTTTTATCAGGAGTTCTCATGCTCTATAGCAATATATTGGCGCAC GCCCGGCGATGTGCACCAGC
Product: antirepressor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKSIAKAQNDFTIFKFGDSEIRVINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGVTLSYTLGGEQNLSIVSESGM YTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYVKGKKTTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRFGI DSIDELSIEQIPLAVEYIHRVVLEGEFIGKQEKSTNELSAKEANSLVWLWDYANRSQALFRELYPALKQIQSNYSGRCYD YGHEFSYVIGMARDVLINHTRDVDINEPDGPTNLSAWMRLKNKELPPSPHHY
Sequences:
>Translated_292_residues MKSIAKAQNDFTIFKFGDSEIRVINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGVTLSYTLGGEQNLSIVSESGM YTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYVKGKKTTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRFGI DSIDELSIEQIPLAVEYIHRVVLEGEFIGKQEKSTNELSAKEANSLVWLWDYANRSQALFRELYPALKQIQSNYSGRCYD YGHEFSYVIGMARDVLINHTRDVDINEPDGPTNLSAWMRLKNKELPPSPHHY >Mature_292_residues MKSIAKAQNDFTIFKFGDSEIRVINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGVTLSYTLGGEQNLSIVSESGM YTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYVKGKKTTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRFGI DSIDELSIEQIPLAVEYIHRVVLEGEFIGKQEKSTNELSAKEANSLVWLWDYANRSQALFRELYPALKQIQSNYSGRCYD YGHEFSYVIGMARDVLINHTRDVDINEPDGPTNLSAWMRLKNKELPPSPHHY
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Bro-N domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003497 - InterPro: IPR018876 [H]
Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 33188; Mature: 33188
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIAKAQNDFTIFKFGDSEIRVINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGV CCCHHHCCCCEEEEEECCCCEEEHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCE TLSYTLGGEQNLSIVSESGMYTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYVK EEEEEECCCCCCEEEECCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GKKTTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRFGIDSIDELSIEQIPLAVEYIHR CCCCCHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHH VVLEGEFIGKQEKSTNELSAKEANSLVWLWDYANRSQALFRELYPALKQIQSNYSGRCYD HHHCCHHCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEE YGHEFSYVIGMARDVLINHTRDVDINEPDGPTNLSAWMRLKNKELPPSPHHY CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKSIAKAQNDFTIFKFGDSEIRVINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGV CCCHHHCCCCEEEEEECCCCEEEHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCE TLSYTLGGEQNLSIVSESGMYTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYVK EEEEEECCCCCCEEEECCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GKKTTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRFGIDSIDELSIEQIPLAVEYIHR CCCCCHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHH VVLEGEFIGKQEKSTNELSAKEANSLVWLWDYANRSQALFRELYPALKQIQSNYSGRCYD HHHCCHHCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEE YGHEFSYVIGMARDVLINHTRDVDINEPDGPTNLSAWMRLKNKELPPSPHHY CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]