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The map label for this gene is nohA [H]

Identifier: 209400106

GI number: 209400106

Start: 1194730

End: 1194972

Strand: Direct

Name: nohA [H]

Synonym: ECH74115_1184

Alternate gene names: 209400106

Gene position: 1194730-1194972 (Clockwise)

Preceding gene: 209397322

Following gene: 209400197

Centisome position: 21.44

GC content: 44.86

Gene sequence:

>243_bases
GTGTCAAAAGGAAAACTGATTGACACCGGGTTCTGTATTTTTGCCCTCAGTAAGCTGGCAATGGCGTTATCCAGTACGCT
TGATTCCATCCCTTTATCCATGCAGCGACAGTTTCCTGATTTAACACCGCGCCATCTTGACCATCTGAAAACCCTTATTG
CTAAGGGGGCAAATCAGTGTGCGCGGGCAGGGGATAAATTACCGGATTTACTTGATGAATATATCAGAGCAACAACTGAA
TAA

Upstream 100 bases:

>100_bases
AACCGGGTCAGCGAACTGCTTCCGTGGCGCATAGCACTGCCAGCTGAATAACACATCCCCGTCAATACGGCCCTCGCTGT
ACGCTTACTTAAAAAATGAG

Downstream 100 bases:

>100_bases
TATGATGAGCGCTGTCACAACTGCATTACAGCCCCTGATAAGGGCATTGCCGGTGACGCCAGTTGAATGGGCTGATCAAA
ATTATTATCTGCCTAAAGAA

Product: DNA packaging Nu1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRATTE

Sequences:

>Translated_80_residues
MSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRATTE
>Mature_79_residues
SKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCARAGDKLPDLLDEYIRATTE

Specific function: Unknown

COG id: COG4220

COG function: function code L; Phage DNA packaging protein, Nu1 subunit of terminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To phage lambda DNA packaging protein NU1 [H]

Homologues:

Organism=Escherichia coli, GI1786773, Length=74, Percent_Identity=45.945945945946, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010906
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07471 Phage_Nu1 [H]

EC number: NA

Molecular weight: Translated: 8804; Mature: 8673

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCHHHH
ARAGDKLPDLLDEYIRATTE
HHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SKGKLIDTGFCIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCHHHH
ARAGDKLPDLLDEYIRATTE
HHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1630906 [H]