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The map label for this gene is ygiQ

Identifier: 209399855

GI number: 209399855

Start: 4002360

End: 4004579

Strand: Reverse

Name: ygiQ

Synonym: ECH74115_4327

Alternate gene names: 209399855

Gene position: 4004579-4002360 (Counterclockwise)

Preceding gene: 209400459

Following gene: 209400234

Centisome position: 71.87

GC content: 54.5

Gene sequence:

>2220_bases
ATGAGCTCTATCTCCCTGATCCAACCGGATCGCGACCTGTTCTCCTGGCCGCAGTACTGGGCCGCCTGTTTTGGACCGGC
ACCGTTTTTGCCGATGTCTCGTGAAGAGATGGATCAACTTGGCTGGGATAGCTGCGACATCATTTTGGTTACTGGCGACG
CGTATGTCGATCACCCAAGCTTCGGGATGGCGATTTGCGGTCGTATGCTGGAAGCACAGGGCTTTCGCGTCGGGATCATC
GCCCAGCCAGACTGGAGCAGCAAAGACGATTTCATGCGTCTGGGTAAACCGAATCTGTTTTTCGGTGTTACTGCTGGCAA
CATGGATTCGATGATCAACCGTTATACCGCCGATCGCCGTTTACGTCATGACGATGCCTACACGCCGGATAACGTCGCGG
GTAAGCGCCCGGATCGCGCCACACTGGTTTATACCCAGCGTTGTAAAGAGGCGTGGAAAGATGTACCGGTGATCCTCGGT
GGTATTGAGGCTAGTCTGCGCCGTACCGCGCATTATGATTACTGGTCCGATACCGTGCGCCGTTCCGTGCTGGTGGATTC
GAAAGCCGACATGCTGATGTTTGGTAACGGTGAGCGTCCGCTGGTGGAGGTGGCGCACCGTCTGGCGATGGGCGAGCCGA
TTAGTGAAATCCGCGATGTGCGTAATACCGCGATTATCGTGAAAGAGGCGCTGCCTGGCTGGAGCGGCGTGGATTCCACC
CGTCTTGATACCCCTGGAAAAATCGACCCAATCCCGCATCCGTATGGTGAAGATTTGCCGTGCGCGGATAACAAACCGGT
GGCACCGAAAAAGCAGGAAGCCAAAGCCGTAACCGTGCAGCCACCGCGCCCGAAACCGTGGGAAAAAACCTACGTGTTGC
TGCCTTCTTTCGAGAAAGTGAAGGGCGATAAAGTGCTGTACGCCCATGCTTCGCGTATTCTGCACCACGAAACTAACCCA
GGTTGCGCCCGCGCATTGATGCAAAAACACGGTGACCGCTATGTGTGGATCAACCCGCCTGCTATCCCGCTTTCTACCGA
AGAGATGGACAGCGTTTTTGCGCTGCCGTACAAGCGCGTGCCACATCCGGCCTATGGCAATGCCCGTATTCCGGCTTACG
AAATGATCCGTTTTTCGGTCAACATTATGCGCGGCTGCTTTGGCGGCTGCTCTTTCTGTTCTATCACCGAGCACGAAGGG
CGCATTATTCAGAGCCGTTCCGAAGATTCGATCATTAATGAGATCGAAGCGATCCGCGACACCGTTCCAGGTTTTACGGG
CGTAATTTCCGATCTCGGTGGGCCAACTGCCAACATGTATATGTTGCGCTGCAAATCGCCACGCGCTGAACAAACCTGCC
GTCGTTTGTCCTGCGTTTACCCGGATATTTGTCCGCATATGGACACTAACCACGAACCGACGATCAACCTCTATCGCCGC
GCTCGCGATCTGAAAGGCATTAAAAAGATTCTGATTGCCTCAGGCGTACGTTATGACATCGCCGTGGAAGATCCGCGCTA
TATCAAAGAACTGGCGACCCATCACGTCGGCGGTTATCTGAAGATTGCTCCGGAACATACCGAAGAAGGGCCGTTGTCGA
AGATGATGAAGCCGGGCATGGGCAGTTATGACCGCTTTAAAGAGCTGTTCGATACCTACTCGAAACAGGCAGGTAAAGAG
CAGTATCTGATCCCCTATTTCATCTCCGCGCACCCCGGTACGCGTGATGAAGATATGGTGAATTTGGCGCTGTGGCTGAA
AAAGCATCGTTTCCGTCTCGACCAGGTACAGAACTTCTACCCATCGCCACTGGCTAACTCGACCACCATGTATTACACCG
GGAAAAACCCGCTGGCGAAGATTGGTTATAAGAGTGAAGACGTCTTCGTACCGAAGGGCGACAAACAGCGTCGTTTGCAT
AAAGCGTTGTTGCGTTACCACGATCCGGCAAACTGGCCGTTAATCCGCCAGGCGCTGGAAGCGATGGGCAAAAAGCATCT
GATTGGCAGCCGTCGCGATTGCTTAGTGCCTGCGCCAACCATTGAAGAGATGCGTGAGGCTCGTCGCCAGAACCGCAATA
CCCGTCCGGCGTTGACGAAACATACGCCGATGGCGACCCAGTGTCAGACGCCTGCTACGGCAAAAAAAGCGTCGTCTACG
CAATCTCGTCCGGTGAATGCTGGTGCGAAGAAACGCCCTAAAGCGGCGGTTGGACGTTAA

Upstream 100 bases:

>100_bases
CGCCCGAGGAGGGCGAGTATGGAATACTTTTCGATTTCTCTTTCGTTCCGGCTTATAATCCCCGGCCTTTGATTATTTTT
TTATCATTTCTGGAAGCAAA

Downstream 100 bases:

>100_bases
AAAAAATCCCCGGCAACTGACATGCTGCCGGGGATTTTTTTATCATTCTGCGTACATACGCAAGCAGCGTAGGCAATCAA
AATAGTCCTGTGCATCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 738

Protein sequence:

>739_residues
MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII
AQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP
GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEG
RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE
QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLH
KALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQCQTPATAKKASST
QSRPVNAGAKKRPKAAVGR

Sequences:

>Translated_739_residues
MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII
AQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP
GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEG
RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE
QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLH
KALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQCQTPATAKKASST
QSRPVNAGAKKRPKAAVGR
>Mature_738_residues
SSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIA
QPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGG
IEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTR
LDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPG
CARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGR
IIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA
RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQ
YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHK
ALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQCQTPATAKKASSTQ
SRPVNAGAKKRPKAAVGR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family

Homologues:

Organism=Escherichia coli, GI48994917, Length=739, Percent_Identity=99.8646820027064, Blast_Score=1538, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGIQ_ECO57 (Q8XBS7)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D85961
- PIR:   D91116
- RefSeq:   NP_289593.1
- RefSeq:   NP_311927.1
- ProteinModelPortal:   Q8XBS7
- EnsemblBacteria:   EBESCT00000025904
- EnsemblBacteria:   EBESCT00000059802
- GeneID:   916273
- GeneID:   958500
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4370
- KEGG:   ecs:ECs3900
- GeneTree:   EBGT00050000011404
- HOGENOM:   HBG500854
- OMA:   FLPMSRA
- ProtClustDB:   PRK01254
- BioCyc:   ECOL83334:ECS3900-MONOMER
- HAMAP:   MF_01251
- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946
- SMART:   SM00729

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N

EC number: NA

Molecular weight: Translated: 83426; Mature: 83295

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEECCCC
FGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHH
RSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST
HHHEECCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCCCCC
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHH
KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRV
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHC
PHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHH
TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
HCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCC
GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE
CCCCCCCEEEEEECCCCHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
AMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQCQTPATAKKASST
HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
QSRPVNAGAKKRPKAAVGR
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEECCCC
FGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRR
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHH
RSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST
HHHEECCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCCCCCC
RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHH
KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRV
CCCEEEEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCHHHC
PHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCHHHHHHHHHHHHH
TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR
HCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCC
GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE
CCCCCCCEEEEEECCCCHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
AMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQCQTPATAKKASST
HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
QSRPVNAGAKKRPKAAVGR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796