Click here to switch to the map view.

The map label for this gene is yidK [H]

Identifier: 209399812

GI number: 209399812

Start: 4751981

End: 4753696

Strand: Reverse

Name: yidK [H]

Synonym: ECH74115_5111

Alternate gene names: 209399812

Gene position: 4753696-4751981 (Counterclockwise)

Preceding gene: 209396857

Following gene: 209399130

Centisome position: 85.31

GC content: 53.21

Gene sequence:

>1716_bases
ATGAATTCGTTACAAATCTTGAGTTTTGTCGGTTTTACGCTGCTGGTGGCGATCATCACCTGGTGGAAGGTTCGCAAAAC
AGATACCGGATCGCAACAAGGCTATTTTCTTGCCGGACGTTCACTAAAAGCGCCGGTTATTGCCGCTTCGTTAATGTTAA
CCAACCTTTCCACGGAACAACTGGTTGGTCTTTCCGGGCAGGCCTACAAAAGCGGCATGTCGGTGATGGGCTGGGAAGTG
ACTTCAGCGGTGACGCTGATCTTCCTCGCGCTAATCTTTTTACCGCGCTATCTGAAGCGCGGCATTGCCACCATCCCCGA
TTTTCTGGAGGAACGTTATGATAAAACGACGCGTATGATCATCGACTTCTGCTTCCTCATTGCCACCGGCGTCTGCTTTC
TGCCGATTGTTCTCTACTCCGGCGCGTTGGCGCTCAACAGCCTGTTTCACGTCGGGGAATCGCTACAGATTTCTCACGGT
GCGGCTATCTGGCTACTGGTAATTTTGCTTGGTCTGGCGGGAATTTTGTATGCGGTGATCGGCGGACTGCGCGCAATGGC
AGTGGCGGACTCCATCAACGGTATTGGGCTGGTTATCGGCGGGTTGATGGTGCCGGTATTTGGCTTGATCGCGATGGGCA
AGGGCAGCTTTATGCAGGGCATTGAGCAAATTACCACCGTTCACGCCGAGAAATTAAACTCAGTCGGTGGCCCGACCGAT
CCCTTGCCGATTGGCGCGGCATTTACCGGTTTAATTCTGGTGAACACCTTTTACTGGTGTACAAATCAGGGCATCGTGCA
ACGCACGCTGGCGTCAAAAAGCCTGGCGGAAGGGCAAAAGGGGGCGCTGTTAACGGCGGTGCTGAAAATGCTCGACCCGC
TGGTACTGGTGCTGCCAGGGTTGATTGCGTTTCATCTGTATCAGGATCTACCGAAAGCCGACATGGCCTACCCGACGCTG
GTCAATAACGTTCTGCCAGTGCCACTGGTGGGTTTCTTCGGCGCGGTGTTATTTGGTGCAGTGATCAGTACCTTCAACGG
CTTTCTGAATAGCGCCAGTACGTTATTCAGTATGGGTATTTACCGTCGCATCATTAACCAGAATGCCGAGCCGCAGCAGC
TGGTCACCGTCGGGCGCAAATTTGGTTTCTTTATCGCTATCGTTTCGGTGCTGGTAGCGCCGTGGATCGCCAACGCGCCG
CAGGGGCTGTATAGCTGGATGAAACAGCTCAACGGCATTTACAACGTGCCGCTGGTTACCATCATCATTATGGGCTTTTT
CTTCCTGCGCATCCCGGCGCTGGCGGCAAAAGTGGCGATGGGGATTGGCATAATCAGCTACATCACCATCAACTATCTGG
TGAAGTTCGACTTCCATTTCCTCTATGTGCTGGCCTGTACGTTCTGCATCAACGTGGTCGTGATGCTGGTGATCGGTTTT
ATCAAACCGCGCGCCACGCCGTTCACCTTCAAAGATGCGTTTGCGGTGGACATGAAACCGTGGAAAAACGTCAAGATCGC
GTCAATTGGCATCCTGTTCGCGATGATTGGCGTCTATGCCGGGCTGGCTGAATTCGGCGGCTACGGTACGCGCTGGTTAG
CGATGATCAGTTATTTCATTGCCGCCGTAGTGATTGTCTACCTGATTTTTGACAGCTGGCGGCATCGTCACGACCCAGCC
GTAACCTTTACTCCCGACGCGAAGGATAGCCTATGA

Upstream 100 bases:

>100_bases
ACGACGTTTGTATTTTAAGAATCTGACTGCCTGACCCGACGCATTTTACCTCTCCCTATATTCATGCGTCCGGGACATAA
ACATAAATAAGGGCTATGAG

Downstream 100 bases:

>100_bases
AACGCCCCAATTTTCTGTTCATCATGACCGATACCCAGGCCCCCAATATGGTCGGTTGCTATAGCGGTAAACCGCTGAAT
ACGCAAAATATTGATAGTCT

Product: putative symporter YidK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MNSLQILSFVGFTLLVAIITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRMIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQITTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFLRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF
IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPA
VTFTPDAKDSL

Sequences:

>Translated_571_residues
MNSLQILSFVGFTLLVAIITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRMIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQITTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFLRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF
IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPA
VTFTPDAKDSL
>Mature_571_residues
MNSLQILSFVGFTLLVAIITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEV
TSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRMIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHG
AAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQITTVHAEKLNSVGGPTD
PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTL
VNNVLPVPLVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAP
QGLYSWMKQLNGIYNVPLVTIIIMGFFFLRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF
IKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPA
VTFTPDAKDSL

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI110835708, Length=461, Percent_Identity=28.6334056399132, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI17941285, Length=456, Percent_Identity=29.3859649122807, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI14140236, Length=488, Percent_Identity=26.6393442622951, Blast_Score=169, Evalue=8e-42,
Organism=Homo sapiens, GI4507031, Length=468, Percent_Identity=27.1367521367521, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI4507033, Length=473, Percent_Identity=30.2325581395349, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI206597483, Length=505, Percent_Identity=27.5247524752475, Blast_Score=159, Evalue=8e-39,
Organism=Homo sapiens, GI109659836, Length=454, Percent_Identity=29.5154185022026, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI109659839, Length=470, Percent_Identity=28.2978723404255, Blast_Score=150, Evalue=4e-36,
Organism=Homo sapiens, GI206597487, Length=530, Percent_Identity=26.9811320754717, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI256985183, Length=418, Percent_Identity=25.3588516746411, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI157671931, Length=451, Percent_Identity=22.8381374722838, Blast_Score=84, Evalue=5e-16,
Organism=Homo sapiens, GI4507035, Length=426, Percent_Identity=22.3004694835681, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI167466278, Length=340, Percent_Identity=24.7058823529412, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI310128183, Length=394, Percent_Identity=24.6192893401015, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1790113, Length=571, Percent_Identity=98.7740805604203, Blast_Score=1135, Evalue=0.0,
Organism=Escherichia coli, GI87082237, Length=471, Percent_Identity=23.9915074309979, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533094, Length=431, Percent_Identity=20.4176334106729, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221459584, Length=335, Percent_Identity=28.955223880597, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI19920916, Length=359, Percent_Identity=23.9554317548747, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24645928, Length=519, Percent_Identity=23.3140655105973, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI161076631, Length=347, Percent_Identity=23.9193083573487, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28573698, Length=342, Percent_Identity=24.5614035087719, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI221459586, Length=430, Percent_Identity=22.5581395348837, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24651739, Length=336, Percent_Identity=22.0238095238095, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641117, Length=324, Percent_Identity=22.5308641975309, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221459588, Length=440, Percent_Identity=22.7272727272727, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 62116; Mature: 62116

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCEEECCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]