| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is rlmG [H]
Identifier: 209399561
GI number: 209399561
Start: 4077453
End: 4078589
Strand: Reverse
Name: rlmG [H]
Synonym: ECH74115_4398
Alternate gene names: 209399561
Gene position: 4078589-4077453 (Counterclockwise)
Preceding gene: 209397077
Following gene: 209397417
Centisome position: 73.2
GC content: 54.27
Gene sequence:
>1137_bases ATGAGCCACTTAGACAACGGTTTCCGTTCACTGACACTACAACGTTTTCCGGCGACGGATGACGTTAACCCGCTACAGGC GTGGGAAGCGGCGGATGAATATTTGCTGCAACAGTTGGACGACACAGAAATCCGCGGCCCGGTGTTGATCCTGAATGATG CCTTTGGTGCGTTAAGCTGCGCGCTGGCGGAACATAAGCCGTACAGCATTGGCGACTCATACATCAGTGAACTGGCGACG CGCGAGAATTTACGCCTCAACGGGATTGATGAGTCGAGCGTGAAGTTTCTCGACAGCACCGCCGACTACCCGCAACAGCC GGGTGTGGTGCTGATCAAAGTGCCGAAAACACTGGCATTGCTGGAACAGCAACTGCGTGCGCTGCGCAAAGTGGTCACGC CACAAACACGTATTATTGCCGGTGCCAAAGCCCGTGACATCCACACTTCCACGCTGGAACTATTCGAAAAAGTGCTCGGC CCGACCACCACCACGCTGGCATGGAAGAAAGCGCGCCTGATTAACTGCACTTTCAATGAACCACCGCTGGCCGATGCGCC GCAGACCGTTAGCTGGAAGCTGGAAGGTACTGACTGGACTATCCACAACCATGCGAATGTCTTCTCCCGCACCGGGCTGG ATATCGGCGCGCGCTTCTTTATGCAACATCTGCCAGAGAATCTCGAAGGGGAGATTGTCGATCTCGGTTGCGGTAATGGC GTTATTGGTCTGACGCTGCTTGATAAAAACCCGCAGGCGAAAGTGGTGTTTGTCGATGAATCGCCGATGGCGGTTGCTTC CAGCCGTTTGAACGTTGAAACCAACATGCCAGAGGCGTTGGATCGCTGCGAATTTATGATCAACAACGCGCTCTCCGGCG TGGAGCCTTTCCGCTTTAATGCTGTGCTCTGCAACCCGCCGTTTCATCAGCAACATGCGCTGACCGATAACGTCGCCTGG GAGATGTTCCACCACGCCCGCCGCTGCCTGAAAATCAACGGCGAGCTGTATATCGTTGCCAACCGTCACCTGGATTACTT CCATAAACTGAAGAAAATTTTCGGCAACTGCACCACCATCGCCACGAATAATAAATTTGTGGTGCTGAAAGCAGTGAAGC TGGGGCGTCGTCGGTAA
Upstream 100 bases:
>100_bases AAGTAAGATTGCTCATAACCGCCCACGAAAAAGAGAAAAAGGGTATACTCACGCACCCTTTTCAGGGGCAATGTCGAAAT TTTATCATTCAGGAGGGCCG
Downstream 100 bases:
>100_bases GATTGACAGCTACCTGCCAGATAAGGCGTAAACGCCTTATCTGGCATACGTTTAGCACATTACCCCCAGGTCGGATAAGA TGCGGCAAGCGTCGCATCCG
Product: methyltransferase family protein
Products: NA
Alternate protein names: 23S rRNA m2G1835 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rlmG [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELAT RENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTPQTRIIAGAKARDIHTSTLELFEKVLG PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAW EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR
Sequences:
>Translated_378_residues MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELAT RENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTPQTRIIAGAKARDIHTSTLELFEKVLG PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAW EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR >Mature_377_residues SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATR ENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTPQTRIIAGAKARDIHTSTLELFEKVLGP TTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGV IGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWE MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR
Specific function: Specifically methylates the guanosine in position 1835 (m2G1835) of 23S rRNA [H]
COG id: COG2813
COG function: function code J; 16S RNA G1207 methylase RsmC
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RlmG family [H]
Homologues:
Organism=Escherichia coli, GI87082206, Length=378, Percent_Identity=99.2063492063492, Blast_Score=779, Evalue=0.0, Organism=Escherichia coli, GI1790830, Length=173, Percent_Identity=33.5260115606936, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR017237 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.174 [H]
Molecular weight: Translated: 42324; Mature: 42193
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC CCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL HHHCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHH LEQQLRALRKVVTPQTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCC PPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG CCCCCCCCCEEEEECCCEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCC VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN EEEEEEECCCCCEEEEEECCCCHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEE AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI EEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHHHHCCCEEE ATNNKFVVLKAVKLGRRR EECCCEEEEEEECCCCCC >Mature Secondary Structure SHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC CCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL HHHCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCCCCCCEEEEECCHHHHH LEQQLRALRKVVTPQTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCC PPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNG CCCCCCCCCEEEEECCCEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCC VIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFN EEEEEEECCCCCEEEEEECCCCHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEE AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI EEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHHHHCCCEEE ATNNKFVVLKAVKLGRRR EECCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA