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The map label for this gene is yjdK

Identifier: 209399545

GI number: 209399545

Start: 5282324

End: 5282530

Strand: Direct

Name: yjdK

Synonym: ECH74115_5643

Alternate gene names: 209399545

Gene position: 5282324-5282530 (Clockwise)

Preceding gene: 209396935

Following gene: 209399837

Centisome position: 94.8

GC content: 36.71

Gene sequence:

>207_bases
ATGTATGATATGAATTTCTCTTCTATCGTGGCTGATGAATATGGGATACCACGACAATTGAATGAAAATTCCTTCGCAAT
AACGACATCGTTAGCCGCAAGTGAAATCGAAGATTTAATCAGGCTTAAATGCTTAGACTTACCGGATATTGACTTTGACC
TCAACATTATGACAGTTGATGACTATTTCCGTCAGTTTTACAAGTAG

Upstream 100 bases:

>100_bases
GAGTCATATTATGGAAGGTAAAAACAAGTTCAATACTTATGTTGTTTCTTTTGATTATCCATCATCTTATTCCTCAGTGT
TCTTAAGGTTAAGATCATTG

Downstream 100 bases:

>100_bases
CCAGTAAGGATAAGAAGAACATAAAAAATGGCACTATTCTCTAAAATATTAATTTTTTATGTGATTGGTGTGAACATATC
CTTTGTCATTATCTGGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK

Sequences:

>Translated_68_residues
MYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK
>Mature_68_residues
MYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790570, Length=68, Percent_Identity=100, Blast_Score=140, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJDK_ECO57 (P0AF62)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C86108
- PIR:   F91267
- RefSeq:   NP_290761.1
- RefSeq:   NP_313137.1
- ProteinModelPortal:   P0AF62
- EnsemblBacteria:   EBESCT00000028225
- EnsemblBacteria:   EBESCT00000058299
- GeneID:   914192
- GeneID:   959996
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5730
- KEGG:   ecs:ECs5110
- GeneTree:   EBGT00050000010268
- HOGENOM:   HBG468978
- OMA:   DDYFRQI
- ProtClustDB:   CLSK880850
- BioCyc:   ECOL83334:ECS5110-MONOMER
- InterPro:   IPR022597

Pfam domain/function: PF11080 DUF2622

EC number: NA

Molecular weight: Translated: 7950; Mature: 7950

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVD
CCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHH
DYFRQFYK
HHHHHHCC
>Mature Secondary Structure
MYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVD
CCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHH
DYFRQFYK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796