Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209399379
Identifier: 209399379
GI number: 209399379
Start: 1304794
End: 1305747
Strand: Direct
Name: 209399379
Synonym: ECH74115_1290
Alternate gene names: NA
Gene position: 1304794-1305747 (Clockwise)
Preceding gene: 209398173
Following gene: 209398951
Centisome position: 23.42
GC content: 48.95
Gene sequence:
>954_bases ATGACGGAAAAGAGTATCTACCTGTCTTCCTGGGCGCTTACGGAACCGGACGACATTTTTTATTTTTATCAGCCGACCTG GCTCAACGCCTGGGAAGCACATATGTACGAAAGGGGATTATACGGCACCCGTGCTAATGGCTGGGGACTGAAGCGCTTTG GCGTGGAGAACGATATTTATGCACCAGAACGGATCCGTAATCCACAATATATGCCTTACCTTGAGGCGATGGAGCAGGTG ACCGATTCTGCATTACAACAAATGCCGACTAAAGAACGCATGAAGTTAATGAAATCGCGCACGGCATTTATTTATGCCGA TTCCTGGGGCGAATCCGGTTCGTTTGAAAAAATTTCCAGTGCGCTGCATATCGCCACTATTGATACGCTTCCCAAGAATT TACTTAAGAAGTTTTCGATAACGGAACCGACTTGCAAGATTCGCGGCGAAAAACAGGCATTCGTTCAGGCGCTGCGTATG GCGCAGGATTATCTCGCCTGGGATGTATTCGATAACGTGGTGATTTGTGCTGCCTATCGGGCAATTCCGGTGCTGGTATT CTCTGAAGAAGATGTGGGTAAACCGCCTAAGCGTTTATTTCCCCGTCGTGCTGATGAGGTGAATTTATCTGTTGAACGAG TGGGTTGTTTTATTCTCAGCCAGCGTGAGAGCGCCATCAGGCTGCAATGCGGGGAATATCATTCCGGCACTGCGCCACAG CATGCTACGGATATTGATGTCATGGCCTTCAGCGAACGGCAACAAATGCCGTCCCGGCCTGCTGCTGGCGTTATCGACCT GGTGGCCCATTACGGTGAAAGCGGTTGTCTGACGCCCGCGTTGAGTATGGATTATTTAACCCGTCATATTCAGCCCGGTG GAAAAATGCGTACGGTCATTGCCGATAAACAGTTTGGTTATCACTACTTTGACCTTGAATACCTTGAAGGATAA
Upstream 100 bases:
>100_bases TGACAAACCATAGCAAACGCCATTTGCTGAAGGTTGGTGTGGGTGTCGATGGTTCAGTTATTGGCGTTGTCATGACAAAT ATGCAAGCGGGGCGCGCGAA
Downstream 100 bases:
>100_bases CGACAGTCGTATGCAATCTACTATTAAATCGTTGCCCGCTATTTCGCTTAGCAATATTTATAAGTGTTATGGCGCTGGGG CAGGAAAGGTTGATGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTEKSIYLSSWALTEPDDIFYFYQPTWLNAWEAHMYERGLYGTRANGWGLKRFGVENDIYAPERIRNPQYMPYLEAMEQV TDSALQQMPTKERMKLMKSRTAFIYADSWGESGSFEKISSALHIATIDTLPKNLLKKFSITEPTCKIRGEKQAFVQALRM AQDYLAWDVFDNVVICAAYRAIPVLVFSEEDVGKPPKRLFPRRADEVNLSVERVGCFILSQRESAIRLQCGEYHSGTAPQ HATDIDVMAFSERQQMPSRPAAGVIDLVAHYGESGCLTPALSMDYLTRHIQPGGKMRTVIADKQFGYHYFDLEYLEG
Sequences:
>Translated_317_residues MTEKSIYLSSWALTEPDDIFYFYQPTWLNAWEAHMYERGLYGTRANGWGLKRFGVENDIYAPERIRNPQYMPYLEAMEQV TDSALQQMPTKERMKLMKSRTAFIYADSWGESGSFEKISSALHIATIDTLPKNLLKKFSITEPTCKIRGEKQAFVQALRM AQDYLAWDVFDNVVICAAYRAIPVLVFSEEDVGKPPKRLFPRRADEVNLSVERVGCFILSQRESAIRLQCGEYHSGTAPQ HATDIDVMAFSERQQMPSRPAAGVIDLVAHYGESGCLTPALSMDYLTRHIQPGGKMRTVIADKQFGYHYFDLEYLEG >Mature_316_residues TEKSIYLSSWALTEPDDIFYFYQPTWLNAWEAHMYERGLYGTRANGWGLKRFGVENDIYAPERIRNPQYMPYLEAMEQVT DSALQQMPTKERMKLMKSRTAFIYADSWGESGSFEKISSALHIATIDTLPKNLLKKFSITEPTCKIRGEKQAFVQALRMA QDYLAWDVFDNVVICAAYRAIPVLVFSEEDVGKPPKRLFPRRADEVNLSVERVGCFILSQRESAIRLQCGEYHSGTAPQH ATDIDVMAFSERQQMPSRPAAGVIDLVAHYGESGCLTPALSMDYLTRHIQPGGKMRTVIADKQFGYHYFDLEYLEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36250; Mature: 36119
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKSIYLSSWALTEPDDIFYFYQPTWLNAWEAHMYERGLYGTRANGWGLKRFGVENDIY CCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC APERIRNPQYMPYLEAMEQVTDSALQQMPTKERMKLMKSRTAFIYADSWGESGSFEKISS CHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHH ALHIATIDTLPKNLLKKFSITEPTCKIRGEKQAFVQALRMAQDYLAWDVFDNVVICAAYR HHEEEHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPVLVFSEEDVGKPPKRLFPRRADEVNLSVERVGCFILSQRESAIRLQCGEYHSGTAPQ HEEEEEECCCCCCCCHHHHCCCCCCCCCEEHHHHEEEEEECCCCEEEEECCCCCCCCCCC HATDIDVMAFSERQQMPSRPAAGVIDLVAHYGESGCLTPALSMDYLTRHIQPGGKMRTVI CCCCCCEEEECHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEE ADKQFGYHYFDLEYLEG ECCCCCEEEEEEEEECC >Mature Secondary Structure TEKSIYLSSWALTEPDDIFYFYQPTWLNAWEAHMYERGLYGTRANGWGLKRFGVENDIY CCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCC APERIRNPQYMPYLEAMEQVTDSALQQMPTKERMKLMKSRTAFIYADSWGESGSFEKISS CHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHH ALHIATIDTLPKNLLKKFSITEPTCKIRGEKQAFVQALRMAQDYLAWDVFDNVVICAAYR HHEEEHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPVLVFSEEDVGKPPKRLFPRRADEVNLSVERVGCFILSQRESAIRLQCGEYHSGTAPQ HEEEEEECCCCCCCCHHHHCCCCCCCCCEEHHHHEEEEEECCCCEEEEECCCCCCCCCCC HATDIDVMAFSERQQMPSRPAAGVIDLVAHYGESGCLTPALSMDYLTRHIQPGGKMRTVI CCCCCCEEEECHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEE ADKQFGYHYFDLEYLEG ECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA