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The map label for this gene is osmF [H]

Identifier: 209399202

GI number: 209399202

Start: 2988799

End: 2989716

Strand: Reverse

Name: osmF [H]

Synonym: ECH74115_3256

Alternate gene names: 209399202

Gene position: 2989716-2988799 (Counterclockwise)

Preceding gene: 209399209

Following gene: 209397432

Centisome position: 53.66

GC content: 53.16

Gene sequence:

>918_bases
ATGCCACTCTCAAAGGTCTGGGCAGGTTCACTGGTTTTGTTGGCAGCCGTGAGCCTGCCGCTGCACGCGGCTTCCCCCGT
TAAAGTCGGTTCAAAAATCGATACCGAAGGCGCGCTGCTCGGCAATATCATTTTGCAAGTACTCGAAAGCCACGGAGTAC
CAACGGTCAATAAAGTGCAACTTGGAACGACTCCTGTGGTGCGCGGGGCGATTACTTCCGGTGAACTGGATATCTATCCG
GAATATACCGGCAATGGCGCGTTTTTCTTTAAAGATGAAAACGATGCAGCGTGGAAAAACGCGCAGCAAGGTTACGAGAA
AGTCAAAAAACTCGATGCAGAGCAAAACAAGTTAATCTGGCTGACGCCCGCACCTGCAAATAACACCTGGACCATCGCCG
TGCGTCAGGATGTGGCAGAGAAAAACAAACTCACTTCGCTTGCTGACCTGAGGCGTTATCTGAAAGAGGGCGGCACCTTC
AAACTGGCAGCCTCGGCTGAGTTTATCGAACGCGCCGATGCGTTACCCGCGTTTGAAAAAGCCTACGACTTTAAACTCGA
TCAGGATCAGTTACTGTCACTGGCTGGCGGCGACACGGCGGTAACGATTAAAGCCGCTGCCCAGCAAACTTCTGGCGTTA
ATGCCGCAATGGCTTACGGCACTGACGGTCCGGTCGCGGCGCAGGGGCTGCAAACCTTAAGCGATCCGCAAGGCGTGCAA
CCTATCTACGCGCCTGCACCAGTGGTGCGTGAGTCGGTGCTGAAAGAGTATCCGCAAATGGCACAGTGGCTACAGCCAGT
CTTCGCCAGCCTCGATGCAAAAACATTGCAGCAACTGAATGCCAGCATTGCAGTGGAAGGACTGGATGCCAAAAAAGTGG
CTGCCGACTACTTGAAACAAAAAGGGTGGACGAAGTAA

Upstream 100 bases:

>100_bases
TCTGCAACTGAATCCGTCCGCTCAGGCTAATCCCGCCATTATCAACTATGCTTTTCTCTTAATTCGCTGAAAACAACAGT
AAAAGAATGAGGAAAGCATC

Downstream 100 bases:

>100_bases
TTTCCCGTGACTTATCTACGTATTAATCCTGTTCTGGCGCTGCTGCTGTTGCTGACGGCAATCGCAGCAGCGCTGCCGTT
TATCAGCTACGCGCCTAATC

Product: ABC transporter, quaternary amine uptake transporter (QAT) family, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MPLSKVWAGSLVLLAAVSLPLHAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYP
EYTGNGAFFFKDENDAAWKNAQQGYEKVKKLDAEQNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLRRYLKEGGTF
KLAASAEFIERADALPAFEKAYDFKLDQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAAQGLQTLSDPQGVQ
PIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQKGWTK

Sequences:

>Translated_305_residues
MPLSKVWAGSLVLLAAVSLPLHAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYP
EYTGNGAFFFKDENDAAWKNAQQGYEKVKKLDAEQNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLRRYLKEGGTF
KLAASAEFIERADALPAFEKAYDFKLDQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAAQGLQTLSDPQGVQ
PIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQKGWTK
>Mature_304_residues
PLSKVWAGSLVLLAAVSLPLHAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPE
YTGNGAFFFKDENDAAWKNAQQGYEKVKKLDAEQNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLRRYLKEGGTFK
LAASAEFIERADALPAFEKAYDFKLDQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAAQGLQTLSDPQGVQP
IYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQKGWTK

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=305, Percent_Identity=96.0655737704918, Blast_Score=589, Evalue=1e-170,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32708; Mature: 32576

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSKVWAGSLVLLAAVSLPLHAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQ
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
LGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQQGYEKVKKLDAEQNKLIW
CCCCHHHEEEECCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEE
LTPAPANNTWTIAVRQDVAEKNKLTSLADLRRYLKEGGTFKLAASAEFIERADALPAFEK
EECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCHHHH
AYDFKLDQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAAQGLQTLSDPQGVQ
HHCCCCCHHHHHHHCCCCEEEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCC
PIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCHHHHHHHHHHH
KGWTK
CCCCC
>Mature Secondary Structure 
PLSKVWAGSLVLLAAVSLPLHAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQ
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
LGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQQGYEKVKKLDAEQNKLIW
CCCCHHHEEEECCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEE
LTPAPANNTWTIAVRQDVAEKNKLTSLADLRRYLKEGGTFKLAASAEFIERADALPAFEK
EECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCHHHH
AYDFKLDQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAAQGLQTLSDPQGVQ
HHCCCCCHHHHHHHCCCCEEEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCC
PIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCHHHHHHHHHHH
KGWTK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]