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The map label for this gene is ycaL [H]

Identifier: 209399000

GI number: 209399000

Start: 1093239

End: 1094027

Strand: Direct

Name: ycaL [H]

Synonym: ECH74115_1070

Alternate gene names: 209399000

Gene position: 1093239-1094027 (Clockwise)

Preceding gene: 209400293

Following gene: 209398064

Centisome position: 19.62

GC content: 49.68

Gene sequence:

>789_bases
ATGATTAATCAACGGATGATTCACATGAAGAATACTAAATTACTGCTGGCGATTGTGACCTCTGCAGCATTACTGACGGG
GTGTCAAAATACCCACGGTATTGATACCAATATGGCTATCAGCTCCGGTTTAAATGCCTATAAAGCAGCAACGTTAAGCG
ATGCCGATGCAAAAGCGATTGCCAATCAGGGCTGTGCCGAAATGGACAGCGGCAATCAAGTCGCAAGTAAATCCAGCAAG
TACGGTAAACGTCTGGCAAAAATCGCCAAAGCATTGGGTAACAATATTAATGGCACGCCGGTCAACTATAAGGTTTATAT
GACCAGCGACGTCAACGCATGGGCGATGGCGAACGGCTGTGTTCGTGTTTACAGTGGCCTGATGGACATGATGAACGATA
ACGAAATTGAAGGCGTTCTGGGCCATGAACTGGGCCACGTCGCGTTGGGTCACTCGCTGGCTGAAATGAAAGCTTCTTAT
GCGATCGTTGCCGCACGCGATGCCATTTCAGCTACCAGCGGTGTGGCTTCCCAGCTTTCCCGCTCACAATTGGGTGATAT
CGCAGAAGGCGCTATCAATGCGAAATACTCCCGCGATAAAGAGTCCGAAGCAGATGATTTCTCCTTTGATCTGTTGAAGA
AACGTGGCATCAGCACCCAGGGGCTGGTTGGCAGCTTTGAAAAACTGGCTAGCCTGGATGGCGGTCGCACCCAGTCCATG
TTTGACTCTCACCCACCATCAACAGAGCGTGCGCAACACATCCGTGATCGTATCGCCTCTGGTAAGTAA

Upstream 100 bases:

>100_bases
GTCGGCACATTGCCGGCGTTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTG
TTGATACATAATGTTTATAT

Downstream 100 bases:

>100_bases
ATCATTGTCATCTTTCGGGCTGGTCTTCTGCCAGCCCGCTATAATTGCGCAATAAATCCCCATCTGAATACAGACAAAAC
TGGTTTTTGCACACAACGTT

Product: peptidase, M48B family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MINQRMIHMKNTKLLLAIVTSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAIANQGCAEMDSGNQVASKSSK
YGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASY
AIVAARDAISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFEKLASLDGGRTQSM
FDSHPPSTERAQHIRDRIASGK

Sequences:

>Translated_262_residues
MINQRMIHMKNTKLLLAIVTSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAIANQGCAEMDSGNQVASKSSK
YGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASY
AIVAARDAISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFEKLASLDGGRTQSM
FDSHPPSTERAQHIRDRIASGK
>Mature_262_residues
MINQRMIHMKNTKLLLAIVTSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAIANQGCAEMDSGNQVASKSSK
YGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASY
AIVAARDAISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFEKLASLDGGRTQSM
FDSHPPSTERAQHIRDRIASGK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Escherichia coli, GI87081800, Length=254, Percent_Identity=99.2125984251969, Blast_Score=516, Evalue=1e-148,
Organism=Escherichia coli, GI87082185, Length=248, Percent_Identity=56.4516129032258, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 27820; Mature: 27820

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQRMIHMKNTKLLLAIVTSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAI
CCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHCCCCHHHHHH
ANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGC
HHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHH
VRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHH
RSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFEKLASLDGGRTQSM
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHH
FDSHPPSTERAQHIRDRIASGK
HCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MINQRMIHMKNTKLLLAIVTSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAI
CCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHCCCCHHHHHH
ANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGC
HHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHH
VRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHH
RSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFEKLASLDGGRTQSM
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHH
FDSHPPSTERAQHIRDRIASGK
HCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7836281 [H]