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The map label for this gene is rcnR [H]

Identifier: 209398879

GI number: 209398879

Start: 2858033

End: 2858305

Strand: Reverse

Name: rcnR [H]

Synonym: ECH74115_3088

Alternate gene names: 209398879

Gene position: 2858305-2858033 (Counterclockwise)

Preceding gene: 209396961

Following gene: 209395939

Centisome position: 51.3

GC content: 47.62

Gene sequence:

>273_bases
ATGTCTCATACAATCCGTGATAAACAGAAACTGAAAGCGCGTGCCAGTAAGATTCAGGGCCAGGTCGTGGCGCTCAAGAA
AATGCTCGACGAGCCGCACGAATGCGCTGCAGTTTTACAACAGATTGCTGCTATCCGTGGCGCGGTAAACGGTCTGATGC
GGGAAGTGATTAAAGGTCATCTAACGGAACATATCGTTCACCAGGGGGATGAGCTAAAACGTGAAGAAGATCTGGATGTT
GTTCTGAAGGTGCTGGATTCTTATATCAAATGA

Upstream 100 bases:

>100_bases
AATTCGGCAATCTGATTCTACTCCCCCCAGTACCTGATACTACCCCCCAGTAGATTAATAGTGCTATGATTTTTCATGTT
CTTGTTAACCAGGTGTTGCC

Downstream 100 bases:

>100_bases
AAGTGCCTAATATGGCCGTAGTTGAGGCAATAAATAGAGGGACAAGTGACGTTAAGCTGAATTAGAGTAAATGGCGTGAG
GACACACGCCATTCGAGGTT

Product: transcriptional repressor RcnR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDV
VLKVLDSYIK

Sequences:

>Translated_90_residues
MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDV
VLKVLDSYIK
>Mature_89_residues
SHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDVV
LKVLDSYIK

Specific function: Repressor of rcnA expression. Acts by binding specifically to the rcnA promoter in the absence of nickel and cobalt. In the presence of one of these metals, it has a weaker affinity for rcnA promoter [H]

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frmR/rcnR family [H]

Homologues:

Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=100, Blast_Score=179, Evalue=3e-47,
Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=40.2173913043478, Blast_Score=69, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10134; Mature: 10003

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLMREVIKGH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTEHIVHQGDELKREEDLDVVLKVLDSYIK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLMREVIKGH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTEHIVHQGDELKREEDLDVVLKVLDSYIK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA