| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is thiE [H]
Identifier: 209398607
GI number: 209398607
Start: 5105507
End: 5106142
Strand: Reverse
Name: thiE [H]
Synonym: ECH74115_5461
Alternate gene names: 209398607
Gene position: 5106142-5105507 (Counterclockwise)
Preceding gene: 209399239
Following gene: 209398041
Centisome position: 91.64
GC content: 57.86
Gene sequence:
>636_bases ATGTATCAGCCTGATTTTCCTCCTGTACCTTTTCGTTTAGGACTGTACCCGGTGGTGGACAGCGTACAGTGGATCGAACG TCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGG CGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTCGCGATCAAGCATCAGGCG TATGGCGTCCATTTGGGGCAGGAAGATTTGCAAGCCACCGATCTCAATGCCATCCGCGCGGCAGGCCTGCGGCTGGGCGT TTCGACCCATGACGATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTATATCGCGCTGGGACATGTGTTCCCGA CGCAAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGTCGGATTATCCC ACCGTGGCGATTGGCGGTATCAGTCTGGCACGCGCGCCTGCGGTGATAGCAACGGGTGTCGGCAGTATCGCCGTCGTCAG CGCCATTACTCAAGCCGCAGACTGGCGTTTGGCAACGGCACAGTTGCTGGAAATTGCAGGAGTTGGCGATGAATGA
Upstream 100 bases:
>100_bases ATTACGCCGCCACGCAAACTATTGAAATGGGAATAGCGGATATGTCGGAGAACTTCCGTGCCAGAGGCGGAGAAATCTAC CTGCGTAAGGAGGAAGCGTG
Downstream 100 bases:
>100_bases CCGTGATTTTATGCGTTATAGCCGCCAAATCCTGCTCGACGATATCGCTCTTGACGGGCAGCAAAAACTGCTCGACAGCC AGGTGCTGATTATCGGTCTT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQA YGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLSDYP TVAIGGISLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGVGDE
Sequences:
>Translated_211_residues MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQA YGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLSDYP TVAIGGISLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGVGDE >Mature_211_residues MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQA YGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLSDYP TVAIGGISLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGVGDE
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=211, Percent_Identity=99.0521327014218, Blast_Score=418, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6325042, Length=214, Percent_Identity=28.9719626168224, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 23058; Mature: 23058
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGR CCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCC RYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALA CCCCEEEEEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEEE ARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLSDYPTVAIGGISLARAPAVIATGV CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCHHHHCC GSIAVVSAITQAADWRLATAQLLEIAGVGDE CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGR CCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCC RYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALA CCCCEEEEEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEEE ARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLSDYPTVAIGGISLARAPAVIATGV CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCHHHHCC GSIAVVSAITQAADWRLATAQLLEIAGVGDE CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA