Click here to switch to the map view.

The map label for this gene is cbrA [H]

Identifier: 209398169

GI number: 209398169

Start: 4763465

End: 4764529

Strand: Direct

Name: cbrA [H]

Synonym: ECH74115_5123

Alternate gene names: 209398169

Gene position: 4763465-4764529 (Clockwise)

Preceding gene: 209400457

Following gene: 209395907

Centisome position: 85.49

GC content: 50.99

Gene sequence:

>1065_bases
ATGGAACATTTCGACGTGGCGATTATTGGCCTCGGCCCGGCAGGGTCGGCGTTGGCACGAAAGTTAGCCGGCAAAATGCA
GGTGATCGCGCTGGATAAAAAGCACCAGCATGGTACTGAAGGTTTCAGCAAGCCTTGTGGCGGTCTGCTGGCACCGGACG
CGCAGCGATCTTTTATTCGCGATGGACTGACGCTTCCTGTCGATGTGATCGCCAATCCACAGATTTTCAGCGTCAAAACT
GTCGACGTCGCCGCATCGCTCACGCGTAACTACCAGCGAAGCTATATCAATATTAATCGCCATGCTTTCGACTTGTGGAT
GAAATCGCTGATCCCCGCCAGCGTTGAGGTTTATCACGATAGCCTGTGCCGGAAAATCTGGCGTGAGGATGATAAATGGC
ATGTCATTTTTCGTGCAGACGGTTGGGAGCAGCATATTACTGCCCGCTATCTGGTCGGTGCAGATGGTGCCAACTCGATG
GTGCGGCGATATCTCTACCCGGACCATCAGATTCGTAAATATGTCGCTATCCAGCAGTGGTTCGCAGAGAAACATCCGGT
GCCGTTCTACTCATGCATCTTTGATAATGCGATAACTGACTGTTACTCATGGAGTATCAGCAAAGACGGTTATTTTATCT
TTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAATTCCAG
TTTGGTAAGGCGGTAAAAAGCGAAAAATGCACGGTGCTATTTCCCTCACGCTGGCAGGATTTTGTCTGCGGTAAGGACAA
CGCCTTTCTGATTGGTGAAGCGGCGGGATTTATCAGCGCCAGCTCGCTGGAGGGGATAAGCTATGCGCTGGATAGCGCAG
AGATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGATCAACGCAGCCTACTGGCACGCCACCCGCAAACTGCGTTTA
AAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTATGGC
GCATATTCCACAGTTGAAAGATTAG

Upstream 100 bases:

>100_bases
GGCGCGGTCCTGATACAAAACGGTTCCCGCCATCATACTTCACAAGGACTTCACTTTCAGACAATAGTCTTTTGCCATCG
TGATGAATGTGAGTGAAAAG

Downstream 100 bases:

>100_bases
CCAACGCGCGTCACATCGCCCACCAGCAGGATGTAAGAGAGCGCGCCAATCAACGCGACGGCGGAGATATAAACCAGTGC
AGGTGCGAACCCATAGCCTT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKT
VDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSM
VRRYLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRSVLLKQPEKINAAYWHATRKLRL
KLFGKIVKSRCLTAPALRKWIMRSGMAHIPQLKD

Sequences:

>Translated_354_residues
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKT
VDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSM
VRRYLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRSVLLKQPEKINAAYWHATRKLRL
KLFGKIVKSRCLTAPALRKWIMRSGMAHIPQLKD
>Mature_354_residues
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKT
VDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSM
VRRYLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRSVLLKQPEKINAAYWHATRKLRL
KLFGKIVKSRCLTAPALRKWIMRSGMAHIPQLKD

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbrA family [H]

Homologues:

Organism=Escherichia coli, GI87082319, Length=354, Percent_Identity=96.8926553672316, Blast_Score=718, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 40125; Mature: 40125

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIR
CCCEEEEEEEECCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHD
CCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCHHHHHHHH
SLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRYLYPDHQIRKYVAIQQW
HHHHHHHCCCCCEEEEEEECCCHHHCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHH
FAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHH
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRSVL
HHHHHCCCCEEEECCCCCCHHCCCCCCEEEEECCCCCEECCCCCCHHHHHCHHHHHHHHH
LKQPEKINAAYWHATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGMAHIPQLKD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQHGTEGFSKPCGGLLAPDAQRSFIR
CCCEEEEEEEECCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH
DGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHD
CCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCHHHHHHHH
SLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRYLYPDHQIRKYVAIQQW
HHHHHHHCCCCCEEEEEEECCCHHHCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHH
FAEKHPVPFYSCIFDNAITDCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHH
FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSAEILRSVL
HHHHHCCCCEEEECCCCCCHHCCCCCCEEEEECCCCCEECCCCCCHHHHHCHHHHHHHHH
LKQPEKINAAYWHATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGMAHIPQLKD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA