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The map label for this gene is epaP [H]

Identifier: 209398112

GI number: 209398112

Start: 4720436

End: 4721089

Strand: Reverse

Name: epaP [H]

Synonym: ECH74115_5075

Alternate gene names: 209398112

Gene position: 4721089-4720436 (Counterclockwise)

Preceding gene: 209399172

Following gene: 209400714

Centisome position: 84.73

GC content: 33.03

Gene sequence:

>654_bases
ATGTCTCAATTAATGACCATTGGCTCACAGCCAATATTTTTAATTATTGTATTTTTTCTGTTATCATTACTGCCAATATT
TGTTGTTATTGGTACTTCATTCCTGAAAATTTCTATTGTACTGGGGATATTGAAGAACGCATTAGGCATTCAACAGGTAC
CACCAAACATGGCGCTAACATCAGTGTCTTTGATACTGACAATGTTTATTATGTCTCCGATAATATTACAGATAAATGAT
AATATTTCTCAGGAACCAATCAATTATACCGACTCTGATTTTTTTCAAAAAGTTGATGAGAAAATATTATCACCATATCG
CGGTTTTTTAGAAAAAAATACAGAGAAAGACAATGTAGAGTTTTTTGAACGTGCAGCTCAAAAAAAATTGGGTAATGAAA
CTATCTTAAAAAAAGACTCTCTATTTATACTGTTACCGGCTTTCACGATGGGGCAGCTTGAAGCTGCATTCAAGATAGGT
TTTTTGCTCTATTTACCCTTTATTGCGATAGATTTGATCATTTCCAATATCTTATTGGCCTTGGGTATGATGATGGTATC
GCCAGTAACAATTTCGATTCCTTTTAAGATCTTATTATTCATTCTTGTTGGAGGCTGGCAAAAATTATTCGAATTTCTGT
TGGTGGTGAATTGA

Upstream 100 bases:

>100_bases
AATGAATATATTAGAATAACTTTAGACCCATTAGAGCAAATAAGTATTTTATTGAATTCATTTAAAGATAATTATCTTAG
CATTATTCAGGAATGATGAT

Downstream 100 bases:

>100_bases
TGGATACTGGATATTTTGTTCAATTATGTGTGCAAACGTTCTGGATAATATTTATCCTCTCATTGCCTACAGTCATAGCG
GCCTCTGTTATCGGTATTAT

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSQLMTIGSQPIFLIIVFFLLSLLPIFVVIGTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQIND
NISQEPINYTDSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNETILKKDSLFILLPAFTMGQLEAAFKIG
FLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQKLFEFLLVVN

Sequences:

>Translated_217_residues
MSQLMTIGSQPIFLIIVFFLLSLLPIFVVIGTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQIND
NISQEPINYTDSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNETILKKDSLFILLPAFTMGQLEAAFKIG
FLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQKLFEFLLVVN
>Mature_216_residues
SQLMTIGSQPIFLIIVFFLLSLLPIFVVIGTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDN
ISQEPINYTDSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKKLGNETILKKDSLFILLPAFTMGQLEAAFKIGF
LLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFILVGGWQKLFEFLLVVN

Specific function: Plays A Role In The Flagellum-Specific Transport System. [C]

COG id: COG4790

COG function: function code U; Type III secretory pathway, component EscR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=204, Percent_Identity=40.1960784313725, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005838
- InterPro:   IPR005773 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 24383; Mature: 24252

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLMTIGSQPIFLIIVFFLLSLLPIFVVIGTSFLKISIVLGILKNALGIQQVPPNMALT
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
SVSLILTMFIMSPIILQINDNISQEPINYTDSDFFQKVDEKILSPYRGFLEKNTEKDNVE
HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FFERAAQKKLGNETILKKDSLFILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLA
HHHHHHHHHCCCCHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGMMMVSPVTISIPFKILLFILVGGWQKLFEFLLVVN
HHHHHHCCCCEEHHHHHHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure 
SQLMTIGSQPIFLIIVFFLLSLLPIFVVIGTSFLKISIVLGILKNALGIQQVPPNMALT
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
SVSLILTMFIMSPIILQINDNISQEPINYTDSDFFQKVDEKILSPYRGFLEKNTEKDNVE
HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FFERAAQKKLGNETILKKDSLFILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLA
HHHHHHHHHCCCCHHEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGMMMVSPVTISIPFKILLFILVGGWQKLFEFLLVVN
HHHHHHCCCCEEHHHHHHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]