| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397825
Identifier: 209397825
GI number: 209397825
Start: 3831003
End: 3831572
Strand: Reverse
Name: 209397825
Synonym: ECH74115_4143
Alternate gene names: NA
Gene position: 3831572-3831003 (Counterclockwise)
Preceding gene: 209396721
Following gene: 209399259
Centisome position: 68.76
GC content: 38.07
Gene sequence:
>570_bases ATGACTTCACGAGATCAGGGTATTAATTCTGAACTATCTAATCGAACGATACAATTTAAGGAAAAAATCCATAATGGTAT CCATACAGAATACATCACAGATCAAAAACACAGTAATAATAAAGATCGTGAAAAAAAATACCGCGATGGAGACAAAATAA ATGGACCGCAGGCCCATTCATTAGACATTACTAACGAAAGAAGGTTTGCTGATAACAGAACCATGTTTACTCAACATATC GAAAAGCAAAGGAATGTTAATACGCTCAATCAGAATGATATAAATAATTCTGCTAATAATGCCAATGTGCGCGAAAATGA ATTGACATATCAGTTTCAGCGTTGGGGACAAAATCATACGGTCCGGATTCTGGAAAGTAGTGAAGGGATACGACTAAAAC CATCAGACACACTTGTCTCCGACAGACTCCATGAAGCCCAACACAATGATGTTACAGCACAACGTTGGGTATTGACTGAG CAAGATGAACGACAAGGACAACGACATCAGCCTCATGAGGAGCAAGAAAATGAAGGCAAATTCGAAAACGATCAGAAGGA TGAAAGTTAA
Upstream 100 bases:
>100_bases GTCTATTGACAACAAATCGTCTCTCTAGGTTGACAGGAATCCATCTCTTTCTTTGCAAACAAAAGGAGCCGAGCAATTTT CTACAAAGAAACTTCTCAAT
Downstream 100 bases:
>100_bases TGTTCGGTCTGAGGAAAGTAAATCGAAACACTCTACGTTTGAAACCACTTTTCAAAATTGGAAAGAAAATGGCGAAGATG TTGCATTATTAATGCCCGAA
Product: type III secretion apparatus protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTSRDQGINSELSNRTIQFKEKIHNGIHTEYITDQKHSNNKDREKKYRDGDKINGPQAHSLDITNERRFADNRTMFTQHI EKQRNVNTLNQNDINNSANNANVRENELTYQFQRWGQNHTVRILESSEGIRLKPSDTLVSDRLHEAQHNDVTAQRWVLTE QDERQGQRHQPHEEQENEGKFENDQKDES
Sequences:
>Translated_189_residues MTSRDQGINSELSNRTIQFKEKIHNGIHTEYITDQKHSNNKDREKKYRDGDKINGPQAHSLDITNERRFADNRTMFTQHI EKQRNVNTLNQNDINNSANNANVRENELTYQFQRWGQNHTVRILESSEGIRLKPSDTLVSDRLHEAQHNDVTAQRWVLTE QDERQGQRHQPHEEQENEGKFENDQKDES >Mature_188_residues TSRDQGINSELSNRTIQFKEKIHNGIHTEYITDQKHSNNKDREKKYRDGDKINGPQAHSLDITNERRFADNRTMFTQHIE KQRNVNTLNQNDINNSANNANVRENELTYQFQRWGQNHTVRILESSEGIRLKPSDTLVSDRLHEAQHNDVTAQRWVLTEQ DERQGQRHQPHEEQENEGKFENDQKDES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22344; Mature: 22213
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRDQGINSELSNRTIQFKEKIHNGIHTEYITDQKHSNNKDREKKYRDGDKINGPQAHS CCCCCCCCCCHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCE LDITNERRFADNRTMFTQHIEKQRNVNTLNQNDINNSANNANVRENELTYQFQRWGQNHT ECCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE VRILESSEGIRLKPSDTLVSDRLHEAQHNDVTAQRWVLTEQDERQGQRHQPHEEQENEGK EEEEECCCCCEECCCHHHHHHHHHHHHCCCCCHHHEEECCCHHHCCCCCCCCCCHHCCCC FENDQKDES CCCCCCCCC >Mature Secondary Structure TSRDQGINSELSNRTIQFKEKIHNGIHTEYITDQKHSNNKDREKKYRDGDKINGPQAHS CCCCCCCCCHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCE LDITNERRFADNRTMFTQHIEKQRNVNTLNQNDINNSANNANVRENELTYQFQRWGQNHT ECCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE VRILESSEGIRLKPSDTLVSDRLHEAQHNDVTAQRWVLTEQDERQGQRHQPHEEQENEGK EEEEECCCCCEECCCHHHHHHHHHHHHCCCCCHHHEEECCCHHHCCCCCCCCCCHHCCCC FENDQKDES CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA