Click here to switch to the map view.

The map label for this gene is ycbW [H]

Identifier: 209397700

GI number: 209397700

Start: 1138779

End: 1139321

Strand: Direct

Name: ycbW [H]

Synonym: ECH74115_1111

Alternate gene names: 209397700

Gene position: 1138779-1139321 (Clockwise)

Preceding gene: 209397463

Following gene: 209398993

Centisome position: 20.44

GC content: 49.17

Gene sequence:

>543_bases
ATGCGAATTAAACCAGACGATAACTGGCGTTGGTATTACGATGAAGAGCACGATCGTATGATGCTCGATTTAGCCAATGG
TATGCTATTTCGCTCACGTTTTGCGCGCAAAATGTTGACTCCAGATGCCTTTTCTCCCGCAGGCTTTTGCGTTGACGACG
CCGCGCTCTATTTCTCTTTTGAAGAAAAGTGCCGCGATTTTAATTTATCTAAAGAACAAAAAGCCGAACTGGTGCTGAAT
GCACTGGTAGCAATTCGCTATCTCAAACCGCAAATGCCGAAAAGCTGGCATTTTGTTTCCCATGGTGAAATGTGGGTGCC
CATGCCGGGCGATGCGGCCTGCGTTTGGTTGAGCGACACTAACGAGCAAGTGAATTTACTGGTCGTTGAATCTGGCGAGA
ATGCCGCGCTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATC
ATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAA

Upstream 100 bases:

>100_bases
TGTTGCTTATTTAGACATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTT
ATAGGGTAGGGGAGAGGCAG

Downstream 100 bases:

>100_bases
CGCGCCAACTTAAGTGCAGTCTTCGGTACACAGCTACAGCAAAGAATGGTGCCATCATCGCCCATTGCTGATTTTTTCAG
CGGCGTGACTTCGCCTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLN
ALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTNEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
MNDRLKPQVNVDSFSLEQAV

Sequences:

>Translated_180_residues
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLN
ALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTNEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
MNDRLKPQVNVDSFSLEQAV
>Mature_180_residues
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLN
ALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTNEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
MNDRLKPQVNVDSFSLEQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=180, Percent_Identity=99.4444444444444, Blast_Score=373, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 20566; Mature: 20566

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSF
CCCCCCCCEEEEEECCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEEH
EEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDT
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCEEEEEEECC
NEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV
CCEEEEEEEECCCCEEEEEEECCCEEEECCCHHHCHHHHHHHHCCCCEECCCCCCHHHCC
>Mature Secondary Structure
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSF
CCCCCCCCEEEEEECCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEEH
EEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDT
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCEEEEEEECC
NEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV
CCEEEEEEEECCCCEEEEEEECCCEEEECCCHHHCHHHHHHHHCCCCEECCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]