| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yfgM [H]
Identifier: 209397682
GI number: 209397682
Start: 3458921
End: 3459541
Strand: Reverse
Name: yfgM [H]
Synonym: ECH74115_3737
Alternate gene names: 209397682
Gene position: 3459541-3458921 (Counterclockwise)
Preceding gene: 209398087
Following gene: 209398578
Centisome position: 62.09
GC content: 49.6
Gene sequence:
>621_bases GTGGAAATTTACGAGAACGAAAACGACCAGGTAGAAGCGATTAAACGCTTTTTTGCTGAAAATGGCAAAGCACTGGCTGT TGGGGTGATTTTGGGCGTTGGCGCACTGATTGGCTGGCGCTACTGGAACAGCCATCAGGTTGATTCTGCACGCTCCGCTT CTCTTGCCTATCAAAATGCGGTTACCGCAGTGAGCGAAGGCAAACCGGATAGCATCCCGGCGGCGGAAAAATTTGCTGCT GAAAATAAAAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGC TGCCGCCCAGTTACAACAGGGGCTGGCAGACACGAGCGATGAAAATCTCAAAGCCGTGATAAATCTGCGTCTTGCTCGCG TTCAGGTACAGCTCAAGCAGGCTGATGCCGCGCTGAAAACCCTTGATACCATCAAAGGTGAAGGGTGGGCTGCCATTGTT GCCGACCTGCGTGGTGAAGCATTGCTGAGCAAAGGTGATAAGCAAGGTGCGCGTAGTGCATGGGAAGCAGGCGTGAAAAG CGATGTTACTCCGGCACTGAGCGAAATGATGCAGATGAAAATTAATAATTTGTCCATCTGA
Upstream 100 bases:
>100_bases TAGTGAAGGATTTGCGCTCTGGTGAGCAAACGGCAGTTGCGCAGGATAGCGTAGCCGCGCATTTGCGCACGTTACTGGGT TAAGGAAGGAGAAGGACAGC
Downstream 100 bases:
>100_bases GAGGGACCCGATGCAATTGCGTAAATTACTGCTGCCAGGACTGCTTTCCGTTACCCTTTTAAGCGGCTGTTCGCTGTTTA ACAGCGAAGAAGATGTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MEIYENENDQVEAIKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAA ENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI
Sequences:
>Translated_206_residues MEIYENENDQVEAIKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAA ENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI >Mature_206_residues MEIYENENDQVEAIKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAA ENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=206, Percent_Identity=99.5145631067961, Blast_Score=411, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR011990 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 22190; Mature: 22190
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIYENENDQVEAIKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNA CCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH VTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSD HHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC ENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIVADLRGEALLSKGDKQGARSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCHHHHHH WEAGVKSDVTPALSEMMQMKINNLSI HHHCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEIYENENDQVEAIKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNA CCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH VTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSD HHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC ENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIVADLRGEALLSKGDKQGARSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCHHHHHH WEAGVKSDVTPALSEMMQMKINNLSI HHHCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503; 9205837 [H]