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The map label for this gene is rcsF [H]

Identifier: 209397672

GI number: 209397672

Start: 222902

End: 223255

Strand: Reverse

Name: rcsF [H]

Synonym: ECH74115_0207

Alternate gene names: 209397672

Gene position: 223255-222902 (Counterclockwise)

Preceding gene: 209400462

Following gene: 209397408

Centisome position: 4.01

GC content: 54.24

Gene sequence:

>354_bases
ATGTTAAGCAGATCCCCTGTCGAACCCGTTCAAAGCACTGCACCCCAGCCGAAAGCGGAGCCTGCAAAACCGAAAGCGCC
GCGCGCCACGCCGGTCCGAATTTATACCAATGCAGAAGAATTAGTCGGCAAACCGTTCCGCGATCTCGGTGAAGTCAGTG
GCGACTCTTGCCAGGCCTCTAATCAGGACTCTCCGCCGAGCATTCCAACCGCGCGTAAGCGGATGCAAATCAACGCCTCG
AAAATGAAAGCCAATGCGGTATTACTGCATAGCTGCGAAGTTACCAGCGGTACGCCAGGCTGCTATCGTCAGGCTTTATG
TATCGGTTCTGCGCTTAACATTACGGCGAAATGA

Upstream 100 bases:

>100_bases
AAGCTCCTGATTCAATATTGACGTTTTGATCATACATTGAGGAAATACTATGCGTGCTTTACCGATCTGTTTAGTAGCAC
TCATGCTAAGCGGCTGTTCC

Downstream 100 bases:

>100_bases
GCAGTTTCCAGTTCGAGCAAATAGGTGTTATTCGCTCGCCCTATAAAGAAAAATTCGCCGTTCCGCGCCAGCCAGGTCTG
GTAAAAAGCGCCAACGGCGA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINAS
KMKANAVLLHSCEVTSGTPGCYRQALCIGSALNITAK

Sequences:

>Translated_117_residues
MLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINAS
KMKANAVLLHSCEVTSGTPGCYRQALCIGSALNITAK
>Mature_117_residues
MLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINAS
KMKANAVLLHSCEVTSGTPGCYRQALCIGSALNITAK

Specific function: Essential component of the Rcs signaling system to promote transcription of the genes for colanic acid capsule synthesis. Together with rcsC, they probably promote the phosphorylation of rcsB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786394, Length=117, Percent_Identity=99.1452991452991, Blast_Score=237, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12417; Mature: 12417

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQAS
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCCCCHHHHHCCCCCCCCC
NQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYRQALCIGSALNITAK
CCCCCCCCCCCHHHHCCCCCHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQAS
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCCCCHHHHHCCCCCCCCC
NQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYRQALCIGSALNITAK
CCCCCCCCCCCHHHHCCCCCHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Stimulates colanic acid capsule synthesis [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]