| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is traT [H]
Identifier: 209397575
GI number: 209397575
Start: 1329284
End: 1329823
Strand: Direct
Name: traT [H]
Synonym: ECH74115_1313
Alternate gene names: 209397575
Gene position: 1329284-1329823 (Clockwise)
Preceding gene: 209396712
Following gene: 209397823
Centisome position: 23.86
GC content: 48.89
Gene sequence:
>540_bases ATGAGTGGACTACAGGGAAAAATTGCCGATGCAGTCAAAGCCAGAGGTTATCAGATCATGACTTCCCCGGATAAAGCTTA CTACTGGATCCAGGCTAACGTTCTCAAAGCAGACAAAATGGATCTGCGTGAATCTCAGGGATGGCTGAGTCGCGGTTATG AAGGTGCAGCAGTCGGAGCTGCTCTTGGAGGTGGAATCACAGCGTACAATACCGGGTCGGCAGGTACCACTCTCGGTGTT GGACTGGCTACCGGTCTGATTGGCATGGCCGCGGATGCAATGGTGGAAGATATAAATTACACAATGATTACAGATGTTCA GATTGCCGAGCGAACCAGAACCAGCGTCAGAACGGATAATGTTGCAGCTTTGCGTCAGGGAACATCAGGCTCCAAAATTC AGACAAGCACAGAAACCGGCAACCAGCATAAATACCAGACCCGGGTTGTATCCAGTGCCAACCAGGTTAATCTGAAGTTT GAAGAAGCTAAACCTCATCTGGAAGACCAGCTGGCAAAATCAATCGCCAATATACTCTGA
Upstream 100 bases:
>100_bases TGGTAGTGTCCGCTATTGTCAGTACACCTCAACCATCTGGCTTGAACCTGCGAGCGAACGCACCGTTTTCCTGCAGATCA AAAACACGTCGGATAAAGAC
Downstream 100 bases:
>100_bases TATAAATATCCCGGTGGCCATTCACCTGGCCTCCGGCCCTCTTAGTCTCAACGTTCAGACAATTCAGATATTATTTTCCC TGTCACACCATATACCCATG
Product: complement resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSGLQGKIADAVKARGYQIMTSPDKAYYWIQANVLKADKMDLRESQGWLSRGYEGAAVGAALGGGITAYNTGSAGTTLGV GLATGLIGMAADAMVEDINYTMITDVQIAERTRTSVRTDNVAALRQGTSGSKIQTSTETGNQHKYQTRVVSSANQVNLKF EEAKPHLEDQLAKSIANIL
Sequences:
>Translated_179_residues MSGLQGKIADAVKARGYQIMTSPDKAYYWIQANVLKADKMDLRESQGWLSRGYEGAAVGAALGGGITAYNTGSAGTTLGV GLATGLIGMAADAMVEDINYTMITDVQIAERTRTSVRTDNVAALRQGTSGSKIQTSTETGNQHKYQTRVVSSANQVNLKF EEAKPHLEDQLAKSIANIL >Mature_178_residues SGLQGKIADAVKARGYQIMTSPDKAYYWIQANVLKADKMDLRESQGWLSRGYEGAAVGAALGGGITAYNTGSAGTTLGVG LATGLIGMAADAMVEDINYTMITDVQIAERTRTSVRTDNVAALRQGTSGSKIQTSTETGNQHKYQTRVVSSANQVNLKFE EAKPHLEDQLAKSIANIL
Specific function: Responsible for preventing unproductive conjugation between bacteria carrying like plasmids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the traT lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008874 [H]
Pfam domain/function: PF05818 TraT [H]
EC number: NA
Molecular weight: Translated: 19046; Mature: 18914
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLQGKIADAVKARGYQIMTSPDKAYYWIQANVLKADKMDLRESQGWLSRGYEGAAVGA CCCCCCHHHHHHHHCCEEEEECCCCEEEEEEEEEECCCHHHHHHHCHHHHCCCCCHHHHH ALGGGITAYNTGSAGTTLGVGLATGLIGMAADAMVEDINYTMITDVQIAERTRTSVRTDN HHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCC VAALRQGTSGSKIQTSTETGNQHKYQTRVVSSANQVNLKFEEAKPHLEDQLAKSIANIL HHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SGLQGKIADAVKARGYQIMTSPDKAYYWIQANVLKADKMDLRESQGWLSRGYEGAAVGA CCCCCHHHHHHHHCCEEEEECCCCEEEEEEEEEECCCHHHHHHHCHHHHCCCCCHHHHH ALGGGITAYNTGSAGTTLGVGLATGLIGMAADAMVEDINYTMITDVQIAERTRTSVRTDN HHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCC VAALRQGTSGSKIQTSTETGNQHKYQTRVVSSANQVNLKFEEAKPHLEDQLAKSIANIL HHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3323526; 7915817; 2680768 [H]