Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209397447
Identifier: 209397447
GI number: 209397447
Start: 3583781
End: 3584188
Strand: Reverse
Name: 209397447
Synonym: ECH74115_3870
Alternate gene names: NA
Gene position: 3584188-3583781 (Counterclockwise)
Preceding gene: 209396681
Following gene: 209399286
Centisome position: 64.32
GC content: 37.5
Gene sequence:
>408_bases GTGGCTCTGGAAAGGCAATTAAATGGAGGTGTCGATTTTTTAAGGAGTGTTAATAACTATTTTCAGAGTGTCATGGCAGA ACACAGAGAAAATAAAACAAGTAATAAAATATTAATGGAAAAAATAAATTCCTGTGTATTTGGAACGGATTCTAATCACT TTTCTTGCCCGGAGTCATTTTTGACATGCCCGATAACGCTGGACACACCTGCGAATGGAGTGTTCATGAGAAACTCACAA GGTGCTGAGATATGCTCTCTATATGATAAGGACACGTTAGTGCAACTTGTTGAAACTGGTGGAGCTCATCCTCTGAGTCG AGAACCTATAACAGAATCAATGATTATGAGAAAAGACGAATGTCACTTTGATTCAAAAAAAGAATCCTTTGTTGCAAGTG ATGCTTAA
Upstream 100 bases:
>100_bases TGTGTTTGGAATGAATATTTAATAACAGGTGTCTGGAAATATAGGGGCAAATCTACTGGATAGGCTATTGGGGCGTGAGA ATCGAATGGAGAGAAGGGCT
Downstream 100 bases:
>100_bases TTTTTTTTGTTGGTGTGTTTTTATATTAATAGTTTATTATAATAGTGCCATGTAAGGATATATTGTCTGAACAATTATTC AGACAATATTTTTTTCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: T3SS Secreted Effector NleG-Like Protein; T3SS Effector; T3SS Secreted Effector NleI/NleG Homolog
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MALERQLNGGVDFLRSVNNYFQSVMAEHRENKTSNKILMEKINSCVFGTDSNHFSCPESFLTCPITLDTPANGVFMRNSQ GAEICSLYDKDTLVQLVETGGAHPLSREPITESMIMRKDECHFDSKKESFVASDA
Sequences:
>Translated_135_residues MALERQLNGGVDFLRSVNNYFQSVMAEHRENKTSNKILMEKINSCVFGTDSNHFSCPESFLTCPITLDTPANGVFMRNSQ GAEICSLYDKDTLVQLVETGGAHPLSREPITESMIMRKDECHFDSKKESFVASDA >Mature_134_residues ALERQLNGGVDFLRSVNNYFQSVMAEHRENKTSNKILMEKINSCVFGTDSNHFSCPESFLTCPITLDTPANGVFMRNSQG AEICSLYDKDTLVQLVETGGAHPLSREPITESMIMRKDECHFDSKKESFVASDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15102; Mature: 14971
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALERQLNGGVDFLRSVNNYFQSVMAEHRENKTSNKILMEKINSCVFGTDSNHFSCPESF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH LTCPITLDTPANGVFMRNSQGAEICSLYDKDTLVQLVETGGAHPLSREPITESMIMRKDE EEECEEECCCCCCEEEECCCCCHHHHHHCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC CHFDSKKESFVASDA CCCCCCCCCCCCCCC >Mature Secondary Structure ALERQLNGGVDFLRSVNNYFQSVMAEHRENKTSNKILMEKINSCVFGTDSNHFSCPESF CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH LTCPITLDTPANGVFMRNSQGAEICSLYDKDTLVQLVETGGAHPLSREPITESMIMRKDE EEECEEECCCCCCEEEECCCCCHHHHHHCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCC CHFDSKKESFVASDA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA