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The map label for this gene is yjcH [H]

Identifier: 209397412

GI number: 209397412

Start: 5213248

End: 5213562

Strand: Reverse

Name: yjcH [H]

Synonym: ECH74115_5573

Alternate gene names: 209397412

Gene position: 5213562-5213248 (Counterclockwise)

Preceding gene: 209399894

Following gene: 209398553

Centisome position: 93.57

GC content: 49.52

Gene sequence:

>315_bases
ATGAATGGCACTATTTATCAGCGGATAGAAGACAATGCGCATTTCAGGGAGTTAGTCGAAAAACGGCAACGGTTTGCCAC
CATCCTGTCGATTATTATGCTGGCAGTTTATATCGGCTTTATTTTACTGATCGCCTTCGCGCCCGGCTGGCTGGGCACCC
CGCTGAATCCGAACACCAGCGTCACACGCGGTATTCCAGTCGGTGTTGGGGTAATAGTGATCTCCTTTGTTCTCACTGGT
ATCTACATCTGGCGGGCGAACGGCGAATTCGACCGTCTTAATAATGAAGTCCTGCATGAGGTACAAGCATCATGA

Upstream 100 bases:

>100_bases
TATCCGGCCTACATTCGGCAAGGGTTACCCGAGCGTTAACCTTCTCCCATAAGGGAGCGGGAATTAAAACAATCCCTACA
TTACCTCTGGAGAATCTGTG

Downstream 100 bases:

>100_bases
AAAGAGTTCTGACGGCGCTTGCCGCCACACTCCCTTTCGCAGCTAACGCCGCGGATGCTATTAGCGGGGCCGTAGAGCGC
CAGCCAACGAACTGGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPVGVGVIVISFVLTG
IYIWRANGEFDRLNNEVLHEVQAS

Sequences:

>Translated_104_residues
MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPVGVGVIVISFVLTG
IYIWRANGEFDRLNNEVLHEVQAS
>Mature_104_residues
MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPVGVGVIVISFVLTG
IYIWRANGEFDRLNNEVLHEVQAS

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=104, Percent_Identity=99.0384615384615, Blast_Score=210, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 11658; Mature: 11658

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTS
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VTRGIPVGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTS
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
VTRGIPVGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]