| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is renD [H]
Identifier: 209397103
GI number: 209397103
Start: 2970940
End: 2971242
Strand: Reverse
Name: renD [H]
Synonym: ECH74115_3229
Alternate gene names: 209397103
Gene position: 2971242-2970940 (Counterclockwise)
Preceding gene: 209398189
Following gene: 209400746
Centisome position: 53.32
GC content: 50.5
Gene sequence:
>303_bases ATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGG CGCAACCGTAACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGC GAACGGTGTATTACCGGTTCGCTACCAGAGAAGAACGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGC CAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGTACACAATGA
Upstream 100 bases:
>100_bases AACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTC GGACTGAAAGGAGCAAGTGT
Downstream 100 bases:
>100_bases TGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATTCTATGAACCCTTATA TTTATCTTGGTGGTGCAATA
Product: hypothetical protein
Products: H2O; 2-oxopent-4-enoate [C]
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEREGKVSTNLIFKECR QSAAMKRVLRVYKRTSMGTQ
Sequences:
>Translated_100_residues MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEREGKVSTNLIFKECR QSAAMKRVLRVYKRTSMGTQ >Mature_99_residues TGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEREGKVSTNLIFKECRQ SAAMKRVLRVYKRTSMGTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11131; Mature: 11000
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRF CCCHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH ATREEREGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRF CCHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH ATREEREGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxy-2-ketovalerate [C]
Specific reaction: 4-hydroxy-2-ketovalerate = H2O + 2-oxopent-4-enoate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]