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The map label for this gene is yohC [H]

Identifier: 209396981

GI number: 209396981

Start: 2995320

End: 2995931

Strand: Reverse

Name: yohC [H]

Synonym: ECH74115_3261

Alternate gene names: 209396981

Gene position: 2995931-2995320 (Counterclockwise)

Preceding gene: 209396096

Following gene: 209396832

Centisome position: 53.77

GC content: 53.27

Gene sequence:

>612_bases
ATGAACTCACAACAAGGGGGCGGTATGAGCCATGTCTGGGGACTGTTTTCCCATCCCGATCGTGAAATGCAGGTGATTAA
TCGCGAAAACGAAACGATTTCTCACCATTACACCCACCACGTTTTGCTGATGGCGGCGATTCCGGTGATTTGCGCCTTCA
TTGGCACTACACAGATTGGCTGGAATTTTGGCGATGGCACTATCCTGAAGTTATCCTGGTTTACCGGACTGGCGCTGGCT
GTCCTGTTTTATGGCGATATGCTCGCTGGGGTCGCGGTGATGGGGCGGGTCATCTGGTGGATGGCGCGTAATTATCCGCA
GCGTCCGTCACTTGCGCACTGCATGGTCTTCGCGGGCTACGTTGCAACTCCGCTGTTTTTAAGTGGTCTGGTGGCGCTTT
ATCCGCTGGTCTGGTTGTGTGCGCTGGTCGGCACGGTGGCACTGTTTTACACCGGTTACCTACTTTACCTTGGTATTCCG
AGCTTCCTGAATATCAACAAAGAGGAAGGCCTTAGCTTCTCCAGTTCGACGCTGGCGATTGGCGTGCTGGTACTGGAAGT
GCTGCTCGCCCTTACCGTTATACTATGGGGCTACGGTTATCGTTTGTTCTAG

Upstream 100 bases:

>100_bases
GAATCATTCACGCTGAAAAAGGACGTACATCAGACGGTGCAAATTACATGGGCGAACAAAAAATAATCACAAGCTGACTT
ATACTTGAACTGTCAGGTTC

Downstream 100 bases:

>100_bases
AAAGTTCTTTGACGTTGCATTGCTGGCGTAAATGTCAGCAATGCAGCATTTCCTCACGATTCTCCTTTGACGATCGCACT
TTTTGCTCGTTATGATGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MNSQQGGGMSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALA
VLFYGDMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIP
SFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF

Sequences:

>Translated_203_residues
MNSQQGGGMSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALA
VLFYGDMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIP
SFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF
>Mature_203_residues
MNSQQGGGMSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALA
VLFYGDMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIP
SFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082055, Length=195, Percent_Identity=99.4871794871795, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 22467; Mature: 22467

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQQGGGMSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIG
CCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WNFGDGTILKLSWFTGLALAVLFYGDMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGY
EECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCHHHHHH
GVLVLEVLLALTVILWGYGYRLF
HHHHHHHHHHHHHHHHHCCHHCC
>Mature Secondary Structure
MNSQQGGGMSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIG
CCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WNFGDGTILKLSWFTGLALAVLFYGDMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGY
EECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCHHHHHH
GVLVLEVLLALTVILWGYGYRLF
HHHHHHHHHHHHHHHHHCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]