Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
---|---|
Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is dinJ [H]
Identifier: 209396967
GI number: 209396967
Start: 286768
End: 287028
Strand: Reverse
Name: dinJ [H]
Synonym: ECH74115_0270
Alternate gene names: 209396967
Gene position: 287028-286768 (Counterclockwise)
Preceding gene: 209397087
Following gene: 209400375
Centisome position: 5.15
GC content: 47.51
Gene sequence:
>261_bases ATGGCTGCTAACGCATTTGTTCGCGCCCGAATCGATGAAGATCTGAAGAATCAGGCGGCGGACGTACTGGCCGGGATGGG GCTGACCATCTCTGACCTGGTTCGCATAACCCTCACAAAGGTCGCGCGTGAAAAGGCATTGCCGTTTGATTTACGCGAGC CTAATCAATTAACCATTCAATCAATCAAAAACAGCGAAGCTGGCGTTGATGTTCATAAGGCCAAAGACGCCGATGATTTA TTTGATAAATTAGGAGTTTAA
Upstream 100 bases:
>100_bases TGTAAAAACATCCGTTTATTAAATTACTCATAGATTGTCGCTGTTGCTCATTTGAGCTACAATTCAAGCTGAATAAATAT ACAGCATAGGAGATATCCCA
Downstream 100 bases:
>100_bases ATATGATTCAAAGGGATATTGAACTCGGGACAATTTTCAAAGGATGTAAAACTTGCACAAAAGCGTCATAAGGATATGAA TAAATTGAAATATCTTATGA
Product: addiction module antitoxin component DinJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKNSEAGVDVHKAKDADDL FDKLGV
Sequences:
>Translated_86_residues MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKNSEAGVDVHKAKDADDL FDKLGV >Mature_85_residues AANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKNSEAGVDVHKAKDADDLF DKLGV
Specific function: Unknown
COG id: COG3077
COG function: function code L; DNA-damage-inducible protein J
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786420, Length=86, Percent_Identity=97.6744186046512, Blast_Score=170, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007337 [H]
Pfam domain/function: PF04221 RelB [H]
EC number: NA
Molecular weight: Translated: 9378; Mature: 9247
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQ CCCCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH SIKNSEAGVDVHKAKDADDLFDKLGV HHCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure AANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQ CCCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH SIKNSEAGVDVHKAKDADDLFDKLGV HHCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7596361; 9278503 [H]