| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yciG
Identifier: 209396856
GI number: 209396856
Start: 1783890
End: 1784069
Strand: Reverse
Name: yciG
Synonym: ECH74115_1890
Alternate gene names: 209396856
Gene position: 1784069-1783890 (Counterclockwise)
Preceding gene: 209400034
Following gene: 209400109
Centisome position: 32.02
GC content: 50.56
Gene sequence:
>180_bases ATGGCCGAACATCGTGGTGGTTCAGGAAATTTCGCCGAAGACCGTGAGAAGGCATCCGACGCAGGCCGTAAAGGCGGTCA GCATAGCGGCGGTAATTTTAAAAATGATCCGCAACGCGCATCTGAAGCGGGTAAAAAAGGCGGTCAACAAAGCGGTGGTA ATAAATCAGGAAAATCCTGA
Upstream 100 bases:
>100_bases ACGCTTAATTTGACTAATCCTCATTAGCGACTAATTTTAATGAGTATCGACACACAACACTCATATTAATGAAACAATGC AACGCAACGGGAGAAATAAC
Downstream 100 bases:
>100_bases TTCACCGTTAATTATTAATATCAGCTGATAAAGATAATTGCATCTGCGGGCCGTATGGCTCGCAGTGATTTCACTGGAGA AAAATATGAATATGAAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 58
Protein sequence:
>59_residues MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS
Sequences:
>Translated_59_residues MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS >Mature_58_residues AEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS
Specific function: Unknown
COG id: COG3729
COG function: function code R; General stress protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the con-10 family
Homologues:
Organism=Escherichia coli, GI87081862, Length=59, Percent_Identity=100, Blast_Score=112, Evalue=6e-27, Organism=Escherichia coli, GI87081817, Length=53, Percent_Identity=86.7924528301887, Blast_Score=90, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YCIG_ECOLI (P21361)
Other databases:
- EMBL: X13583 - EMBL: U23489 - EMBL: U23490 - EMBL: U23491 - EMBL: U23492 - EMBL: U23493 - EMBL: U23495 - EMBL: U23496 - EMBL: U23497 - EMBL: U25417 - EMBL: U25418 - EMBL: U25419 - EMBL: U25420 - EMBL: U25421 - EMBL: U25422 - EMBL: U25423 - EMBL: U25425 - EMBL: U25427 - EMBL: U25429 - EMBL: U00096 - EMBL: AP009048 - PIR: F64873 - RefSeq: AP_001885.1 - RefSeq: NP_415775.4 - IntAct: P21361 - STRING: P21361 - PRIDE: P21361 - EnsemblBacteria: EBESCT00000000244 - EnsemblBacteria: EBESCT00000015231 - GeneID: 947489 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW1251 - KEGG: eco:b1259 - EchoBASE: EB1117 - EcoGene: EG11127 - eggNOG: COG3729 - GeneTree: EBGT00050000009866 - HOGENOM: HBG752117 - OMA: MQRNGRN - ProtClustDB: CLSK923989 - BioCyc: EcoCyc:EG11127-MONOMER - Genevestigator: P21361 - InterPro: IPR019626
Pfam domain/function: PF10685 KGG
EC number: NA
Molecular weight: Translated: 6002; Mature: 5871
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3058546; 9097039; 9278503