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The map label for this gene is quuD [H]

Identifier: 209396823

GI number: 209396823

Start: 1180302

End: 1180427

Strand: Direct

Name: quuD [H]

Synonym: ECH74115_1160

Alternate gene names: 209396823

Gene position: 1180302-1180427 (Clockwise)

Preceding gene: 209400514

Following gene: 209399037

Centisome position: 21.18

GC content: 41.27

Gene sequence:

>126_bases
ATGGCTCTTGCACGTAAGCATAGATGTTCTGATGGGCTTATTGGTAAAAGGCTTTATAAAGCGGAAGGTATTATTGAAGG
AATGCTTATGGCTCTGAATGTCCGGTTAGATATGGATATGCGGTAG

Upstream 100 bases:

>100_bases
TGACGCCATGATAATTTGTGGTTGTATGGCACGATTAAACAAGAATAATCAGTATTTGCACGATTTGTTGGTGGATTATT
ACGTAGGTGGAATGACATTT

Downstream 100 bases:

>100_bases
GGATATATAGTGATGAGGGTTATGTTTTCTGTGTTTATAATTAACATGTTTATTTTTTGATGGTCATGTATTGTGGAAGG
TAGATAAAATGTTGCCTGGT

Product: phage antitermination Q type 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 40

Protein sequence:

>41_residues
MALARKHRCSDGLIGKRLYKAEGIIEGMLMALNVRLDMDMR

Sequences:

>Translated_41_residues
MALARKHRCSDGLIGKRLYKAEGIIEGMLMALNVRLDMDMR
>Mature_40_residues
ALARKHRCSDGLIGKRLYKAEGIIEGMLMALNVRLDMDMR

Specific function: Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage antitermination Q type 1 family [H]

Homologues:

Organism=Escherichia coli, GI1786763, Length=40, Percent_Identity=77.5, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010534 [H]

Pfam domain/function: PF06530 Phage_antitermQ [H]

EC number: NA

Molecular weight: Translated: 4678; Mature: 4547

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
12.2 %Met     (Translated Protein)
14.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
10.0 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALARKHRCSDGLIGKRLYKAEGIIEGMLMALNVRLDMDMR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCC
>Mature Secondary Structure 
ALARKHRCSDGLIGKRLYKAEGIIEGMLMALNVRLDMDMR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8648624; 9278503 [H]