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The map label for this gene is ppdC [H]

Identifier: 209396653

GI number: 209396653

Start: 3789238

End: 3789561

Strand: Reverse

Name: ppdC [H]

Synonym: ECH74115_4088

Alternate gene names: 209396653

Gene position: 3789561-3789238 (Counterclockwise)

Preceding gene: 209397231

Following gene: 209396729

Centisome position: 68.01

GC content: 54.32

Gene sequence:

>324_bases
ATGTCAGCTTCCCTGAAGAATCAACAAGGCTTTAGCCTGCCGGAGGTAATGTTGGCGATGGTGTTGATGGTGATGATTGT
CACTGCGTTATCGGGTTTCCAGCGAACATTAATGAACAGTCTTACCAGCAGAAACCAGTACCAACAGCTCTGGCGGCATG
GTTGGCAGCAAACGCAATTGCGCGCGATTTCGCCACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGA
TGTGTCAGCATCAGCGTTACGCTAGTTTCACCCGGGGGCAGAGCAGGCGAGATGACCCGCCTGCATTGCCCGAATCGTCA
GTAG

Upstream 100 bases:

>100_bases
AAGGCGTTTCGTTGTGGCGAACAGGCGAAGTCATTGATGGAAAAATTGTTTTTTCGCCACGCGGCTGGAGCGATTTTTGT
CCGCTGAAAGAGGGGGCGTT

Downstream 100 bases:

>100_bases
TCAGGAGCCGCTATGTTAAGGGTCTACCATTCCAATCGTCTGGACGTGCTGGAAGCGTTGATGGAGTTTATTGTCGAACG
CGAACGGCTGGACGATCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLTSRNQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAG
CVSISVTLVSPGGRAGEMTRLHCPNRQ

Sequences:

>Translated_107_residues
MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLTSRNQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAG
CVSISVTLVSPGGRAGEMTRLHCPNRQ
>Mature_106_residues
SASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLTSRNQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAGC
VSISVTLVSPGGRAGEMTRLHCPNRQ

Specific function: Not yet known [H]

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789187, Length=107, Percent_Identity=98.1308411214953, Blast_Score=214, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022204
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF12528 DUF3728 [H]

EC number: NA

Molecular weight: Translated: 11976; Mature: 11845

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLTSRNQYQQLWRHGWQQTQL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCE
RAISPPANWQVNRMQTSQAGCVSISVTLVSPGGRAGEMTRLHCPNRQ
EEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLTSRNQYQQLWRHGWQQTQL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCE
RAISPPANWQVNRMQTSQAGCVSISVTLVSPGGRAGEMTRLHCPNRQ
EEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]