| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is hmuT [H]
Identifier: 209396547
GI number: 209396547
Start: 4495266
End: 4496120
Strand: Direct
Name: hmuT [H]
Synonym: ECH74115_4861
Alternate gene names: 209396547
Gene position: 4495266-4496120 (Clockwise)
Preceding gene: 209397132
Following gene: 209395960
Centisome position: 80.67
GC content: 53.1
Gene sequence:
>855_bases GTGGCCTCTGCCGCGAAGACCGCAGTAAAACGTAAAAAATTGTTTACGGCAGTACTGGCTCTTAGCTGGGCTTTTAGCGT AACGGCTGCCGAACGTATCGTGGTCGCAGGAGGATCGCTGACGGAGCTAATCTACGCGATGGGCGCTGGCGAACGCGTGG TTGGTGTCGATGAAACGACATCTTATCCACCAGAAACCGCCAAACTGCCGCATATTGGCTACTGGAAACAACTCAGCAGC GAAGGCATTTTGTCACTTCGCCCGGATAGCGTAATTACCTGGCAGGATGCCGGGCCACAAATTGTGCTCGACCAACTACG AGCGCAGAAAGTCAACGTCGTCACCCTGCCGCGTGTGCCTGCCACCCTTCAGCAGATGTACGCCAACATTCGCCAACTGG CAAAAACGCTACAGGTTCCTGAACAAGGCGAGGCGCTGGTGACACAAATCAGCCAACGCCTGGAGCGAGTACAGCAAAAC GTGGCGACCAAAAAAGCCCCGGTTAAAGCCATGTTTATTCTCTCCGCAGGCGGAAGTGCGCCACAAGTTGCCGGTAAAGG CAGCGTCGCGGACGCCATTCTTTCGCTTGCCGGAGCAGAAAACGTCGCTACCCACCAGCAGTACAAAAGCTACAGTGCAG AATCACTGATTGCGGCTAATCCAGAAGTGATTGTCGTAACCTCACAAATGGTCGATGGCGATATTAATCGGCTACGTTCT ATTGCTGGAATTACCCACACTGCCGCATGGAAAAACCAGCGCATTATCACCGTTGATCAAAACCTGATTCTGGGAATGGG TCCGCGTATTGCTGATGTCGTTGAGTCTTTACACCAGCAGCTTTGGCCGCAATAA
Upstream 100 bases:
>100_bases TAATCATGATCATTCTCAATTTGATAAGAGTTCTCATATTATGCCAAGGATCATCACCAGGCCGTTTCTTTTTTCCCCAC TGACGTTATGTATTTCAGCC
Downstream 100 bases:
>100_bases ATGGATTTAAATCAGACGAATGAACGCAAATAACACCCTGGATCTCACGCCACATTTTGCTTTAGACGGTGATCAGCCAT TTAAAGACAGGCGCGCCATG
Product: periplasmic-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MASAAKTAVKRKKLFTAVLALSWAFSVTAAERIVVAGGSLTELIYAMGAGERVVGVDETTSYPPETAKLPHIGYWKQLSS EGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLQQMYANIRQLAKTLQVPEQGEALVTQISQRLERVQQN VATKKAPVKAMFILSAGGSAPQVAGKGSVADAILSLAGAENVATHQQYKSYSAESLIAANPEVIVVTSQMVDGDINRLRS IAGITHTAAWKNQRIITVDQNLILGMGPRIADVVESLHQQLWPQ
Sequences:
>Translated_284_residues MASAAKTAVKRKKLFTAVLALSWAFSVTAAERIVVAGGSLTELIYAMGAGERVVGVDETTSYPPETAKLPHIGYWKQLSS EGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLQQMYANIRQLAKTLQVPEQGEALVTQISQRLERVQQN VATKKAPVKAMFILSAGGSAPQVAGKGSVADAILSLAGAENVATHQQYKSYSAESLIAANPEVIVVTSQMVDGDINRLRS IAGITHTAAWKNQRIITVDQNLILGMGPRIADVVESLHQQLWPQ >Mature_283_residues ASAAKTAVKRKKLFTAVLALSWAFSVTAAERIVVAGGSLTELIYAMGAGERVVGVDETTSYPPETAKLPHIGYWKQLSSE GILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLQQMYANIRQLAKTLQVPEQGEALVTQISQRLERVQQNV ATKKAPVKAMFILSAGGSAPQVAGKGSVADAILSLAGAENVATHQQYKSYSAESLIAANPEVIVVTSQMVDGDINRLRSI AGITHTAAWKNQRIITVDQNLILGMGPRIADVVESLHQQLWPQ
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG4558
COG function: function code P; ABC-type hemin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786353, Length=220, Percent_Identity=29.5454545454545, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 30553; Mature: 30421
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAAKTAVKRKKLFTAVLALSWAFSVTAAERIVVAGGSLTELIYAMGAGERVVGVDETT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCCCEEEECCCCC SYPPETAKLPHIGYWKQLSSEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVP CCCCCCCCCCCCHHHHHHCCCCCEEECCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCC ATLQQMYANIRQLAKTLQVPEQGEALVTQISQRLERVQQNVATKKAPVKAMFILSAGGSA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC PQVAGKGSVADAILSLAGAENVATHQQYKSYSAESLIAANPEVIVVTSQMVDGDINRLRS CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHEECCCCEEEEEHHHHCCHHHHHHH IAGITHTAAWKNQRIITVDQNLILGMGPRIADVVESLHQQLWPQ HHCCHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ASAAKTAVKRKKLFTAVLALSWAFSVTAAERIVVAGGSLTELIYAMGAGERVVGVDETT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCCCEEEECCCCC SYPPETAKLPHIGYWKQLSSEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVP CCCCCCCCCCCCHHHHHHCCCCCEEECCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCC ATLQQMYANIRQLAKTLQVPEQGEALVTQISQRLERVQQNVATKKAPVKAMFILSAGGSA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC PQVAGKGSVADAILSLAGAENVATHQQYKSYSAESLIAANPEVIVVTSQMVDGDINRLRS CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHEECCCCEEEEEHHHHCCHHHHHHH IAGITHTAAWKNQRIITVDQNLILGMGPRIADVVESLHQQLWPQ HHCCHHHHHCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]