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The map label for this gene is rodZ [H]

Identifier: 209396298

GI number: 209396298

Start: 3462089

End: 3463102

Strand: Reverse

Name: rodZ [H]

Synonym: ECH74115_3741

Alternate gene names: 209396298

Gene position: 3463102-3462089 (Counterclockwise)

Preceding gene: 209400754

Following gene: 209397492

Centisome position: 62.15

GC content: 54.54

Gene sequence:

>1014_bases
ATGAATACTGAAGCCACGCACGACCAAAATGAAGCACTTACTACCGGCGCTCGCCTGCGTAATGCTCGCGAACAACTAGG
ACTTAGTCAGCAGGCCGTTGCCGAGCGACTTTGCCTGAAGGTTTCCACGGTACGCGACATTGAAGAAGATAAGGCACCCG
CCGATCTTGCTTCAACATTCCTGCGCGGATATATCCGCTCTTATGCGCGTCTGGTACATATTCCAGAAGAAGAACTGCTG
CCAGGGCTGGAAAAGCAGGCTCCACTACGGGCTGCAAAAGTTGCGCCGATGCAGAGTTTTTCCCTCGGTAAACGCCGCAA
AAAACGCGACGGCTGGCTGATGACCTTCACCTGGCTGGTGTTGTTTGTGGTTATCGGCCTGAGCGGTGCCTGGTGGTGGC
AAGACCACAAAGCTCAGCAGGAAGAGATCACCACTATGGCCGATCAATCTTCGGCGGAACTGAGCAGTAATAGCGAGCAG
GGGCAGAGTGTTCCGTTAAATACGTCGACAACTACAGACCCGGCTACAACGTCCACGCCGCCAGCGTCTGTGGATACTAC
CGCAACCAACACGCAAACACCTGTCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTT
CGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTTGCCAACC
GATCAGGCTGGCGTGACCACGCCGGTGGCTGATCCGAATGCGCTGGTGATGAACTTTACTGCCGATTGCTGGCTGGAGGT
CACTGATGCTACCGGTAAAAAATTGTTTAGCGGTATGCAGCGTAAAGACGGTAATTTGAACTTAACCGGCCAGGCACCGT
ACAAACTGAAAATTGGTGCGCCAGCCGCAGTACAGATCCAGTATCAAGGGAAACCTGTCGATCTGAGTCGTTTTATCAGA
ACTAACCAGGTTGCGCGTCTGACCCTCAATGCCGAACAATCACCGGCGCAGTAA

Upstream 100 bases:

>100_bases
ATACTGTATGATAACGGTTAACTTAACGGATGTTTCGCGGTGTGGGTGAGCATGATGGTTCACCGGCATCTCAATTCTCA
TTTAAACGTACCTGCAGCGA

Downstream 100 bases:

>100_bases
CAGACGGGTAACGCGGGAGATTTTTCATGCATAACCAGGCTCCAATTCAACGTAGAAAATCAACACGTATTTACGTTGGG
AATGTGCCGATTGGCGATGG

Product: cytoskeletal protein RodZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELL
PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPVVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT
DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIR
TNQVARLTLNAEQSPAQ

Sequences:

>Translated_337_residues
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELL
PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPVVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT
DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIR
TNQVARLTLNAEQSPAQ
>Mature_337_residues
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELL
PGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPVVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT
DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIR
TNQVARLTLNAEQSPAQ

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=337, Percent_Identity=99.406528189911, Blast_Score=680, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 36201; Mature: 36201

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV
HHHHHHHHHHEECCCHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEHHHHHHH
LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP
HHHHHHCCCCEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PASVDTTATNTQTPVVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT
CCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA
CCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCEEEEECC
PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ
CEEEEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV
HHHHHHHHHHEECCCHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEHHHHHHH
LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP
HHHHHHCCCCEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PASVDTTATNTQTPVVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPT
CCCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA
CCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCEEEEECC
PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ
CEEEEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA