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The map label for this gene is 209396252

Identifier: 209396252

GI number: 209396252

Start: 4722890

End: 4723261

Strand: Reverse

Name: 209396252

Synonym: ECH74115_5080

Alternate gene names: NA

Gene position: 4723261-4722890 (Counterclockwise)

Preceding gene: 209397489

Following gene: 209400487

Centisome position: 84.77

GC content: 41.4

Gene sequence:

>372_bases
ATGAATATGGAAAATAATTCACATACAACAAGTCCATACATTCAGCTTATAGAGCAAATTGCAGTTCTACAGCAGGAAGC
AAAGCGACTGCGAGAGCAGGAAGTTCAAAGTGTAATTGAGTCGATTCAGAAGCAGATTACTTATTACAATATAACCTTAC
AAGAGCTGGGATATACTAATGTGCCTGATGATGGACTCGCTCGCCGGAACTCATCGAAAGGTGTTTACTACCGCAATGAA
GAAGGGCAGACCTGGTCGGGCGTAGGCCGACAGCCACGCTGGCTTAAAGAAGCACTGTTGAATGGAATGAAGAAAGAAGA
TTTTCTTGTGAAGGACACTGAAGAAGAAATAATACCGCTGAAAAATATTTAA

Upstream 100 bases:

>100_bases
ACGTTATCTCACATAATTTATATCATTTGATTAATTGTTGGTCCTTCCTGATAAGGTCGCTAATAGCTTAAAATATTAAA
GCATGCGGAGATTATTTATT

Downstream 100 bases:

>100_bases
CATGAAATAATTAAATGATAACGATAACTGAGCTGGAAGATGAAATAATAAAAAATAAAGAAGCCGCAAATGTTTTTATT
GAAAAAATAAACGACAAAAA

Product: Ler

Products: NA

Alternate protein names: Nucleoid Protein H-NS; Histone-Like Nucleoid-Structuring Protein H-NS; Ler Transcriptional Regulator; HNS-Like Transcription Regulator Protein

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNMENNSHTTSPYIQLIEQIAVLQQEAKRLREQEVQSVIESIQKQITYYNITLQELGYTNVPDDGLARRNSSKGVYYRNE
EGQTWSGVGRQPRWLKEALLNGMKKEDFLVKDTEEEIIPLKNI

Sequences:

>Translated_123_residues
MNMENNSHTTSPYIQLIEQIAVLQQEAKRLREQEVQSVIESIQKQITYYNITLQELGYTNVPDDGLARRNSSKGVYYRNE
EGQTWSGVGRQPRWLKEALLNGMKKEDFLVKDTEEEIIPLKNI
>Mature_123_residues
MNMENNSHTTSPYIQLIEQIAVLQQEAKRLREQEVQSVIESIQKQITYYNITLQELGYTNVPDDGLARRNSSKGVYYRNE
EGQTWSGVGRQPRWLKEALLNGMKKEDFLVKDTEEEIIPLKNI

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14330; Mature: 14330

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMENNSHTTSPYIQLIEQIAVLQQEAKRLREQEVQSVIESIQKQITYYNITLQELGYTN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCC
VPDDGLARRNSSKGVYYRNEEGQTWSGVGRQPRWLKEALLNGMKKEDFLVKDTEEEIIPL
CCCCCHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCHHHCCCC
KNI
CCC
>Mature Secondary Structure
MNMENNSHTTSPYIQLIEQIAVLQQEAKRLREQEVQSVIESIQKQITYYNITLQELGYTN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCC
VPDDGLARRNSSKGVYYRNEEGQTWSGVGRQPRWLKEALLNGMKKEDFLVKDTEEEIIPL
CCCCCHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCHHHCCCC
KNI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA