Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209395892
Identifier: 209395892
GI number: 209395892
Start: 2821205
End: 2821630
Strand: Reverse
Name: 209395892
Synonym: ECH74115_3043
Alternate gene names: NA
Gene position: 2821630-2821205 (Counterclockwise)
Preceding gene: 209396666
Following gene: 209397855
Centisome position: 50.64
GC content: 58.45
Gene sequence:
>426_bases ATGTCAAAGCTGATGATTGTGCTGGTTGTGTTGTTATCACTGGCGGTGGCCGGTCTGTTTCTGGCGAAGCATGAAAACGC CAGCCTGCGCGCCTCGCTGGACAGGGCAAACAATGTCGCCAGTGGGCAGCAGACGACCATCATCATGCTGAAAAATCAGC TTCATGTTGCCCTCACCAGGGCAGACAAAAACGAGATGGCGCAGGTGGCACTGCGTCAGGAGCTGGAGAACGCCGCGAAG CGTGAAGCACAGCGCGAGAAAGCCATCACGAGGTTACTCAATGAAAACGAAGATTTTCGCCGCTGGTACGGCACTGACCT GCCTGATGCTGTGCGCCGGTTGCACCAGCGCCCCGCCTGCGCAGACGCCAGTGATTGTCGCCAACGCCTGCCCGAAAGTG AGCCTTTGCCCGATGCCGGGCAGTGA
Upstream 100 bases:
>100_bases CCGCCGGGTGGATTTTTACCGCGCTGATTTATCTTGTGGCGTCGCTGTTTTTCCGGCTGATACGTACGGCCTGCCGTCAG CGTTTTGAGGGGCGGGAACC
Downstream 100 bases:
>100_bases CCCGCAGACGAACGGCGATTTAAGTGCTGATATCCGGCAGCTTGAGAACGCGCTGGCACGCTGTGCCAGCCAGGTAAAAA TGATTAAACACTGTCAGGAC
Product: phage lysis timing protein LysB
Products: NA
Alternate protein names: Phage Lysis Regulatory Protein; Protein Lysb; P2 LysB-Like Protein; Prophage P2 LysB-Like Protein
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSKLMIVLVVLLSLAVAGLFLAKHENASLRASLDRANNVASGQQTTIIMLKNQLHVALTRADKNEMAQVALRQELENAAK REAQREKAITRLLNENEDFRRWYGTDLPDAVRRLHQRPACADASDCRQRLPESEPLPDAGQ
Sequences:
>Translated_141_residues MSKLMIVLVVLLSLAVAGLFLAKHENASLRASLDRANNVASGQQTTIIMLKNQLHVALTRADKNEMAQVALRQELENAAK REAQREKAITRLLNENEDFRRWYGTDLPDAVRRLHQRPACADASDCRQRLPESEPLPDAGQ >Mature_140_residues SKLMIVLVVLLSLAVAGLFLAKHENASLRASLDRANNVASGQQTTIIMLKNQLHVALTRADKNEMAQVALRQELENAAKR EAQREKAITRLLNENEDFRRWYGTDLPDAVRRLHQRPACADASDCRQRLPESEPLPDAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15797; Mature: 15666
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLMIVLVVLLSLAVAGLFLAKHENASLRASLDRANNVASGQQTTIIMLKNQLHVALTR CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH ADKNEMAQVALRQELENAAKREAQREKAITRLLNENEDFRRWYGTDLPDAVRRLHQRPAC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCC ADASDCRQRLPESEPLPDAGQ CCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SKLMIVLVVLLSLAVAGLFLAKHENASLRASLDRANNVASGQQTTIIMLKNQLHVALTR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH ADKNEMAQVALRQELENAAKREAQREKAITRLLNENEDFRRWYGTDLPDAVRRLHQRPAC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCC ADASDCRQRLPESEPLPDAGQ CCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA