Click here to switch to the map view.

The map label for this gene is ybgS [H]

Identifier: 209395790

GI number: 209395790

Start: 872162

End: 872542

Strand: Reverse

Name: ybgS [H]

Synonym: ECH74115_0855

Alternate gene names: 209395790

Gene position: 872542-872162 (Counterclockwise)

Preceding gene: 209400834

Following gene: 209397329

Centisome position: 15.66

GC content: 51.71

Gene sequence:

>381_bases
ATGAAAATGACAAAACTGGCCACACTATTTCTGACTGCCACTCTAAGCCTTGCCAGCGGTGCCGCACTGGCTGCCGATAG
CGGAGCGCAAACCAATAACGGCCAGGCAAACGCCGCAGCTGATGCGGGCCAGGTAGCCCCTGACGCCCGTGAAAATGTCG
CGCCAAATAACGTCGACAATAACGGGGTAAATACCGGTTCTGGCGGCACTATGCTGCATCCGGATGGTTCTTCAATGAAC
AATGACGGCATGACCAAAGATGAAGAGCACAAGAACACCATGTGCAAAGATGGTCGCTGCCCGGATATCAATAAAAAGGT
ACAAACCGGTGATGGCATCAATAATGATGTCGATACCAAAACCGACGGTACCACGCAGTAA

Upstream 100 bases:

>100_bases
TCTTTGCCTGGCTGAAATCTTAAACCAATGCCTTATATTCACCTGCAAATGCACTGTTGGAAGAGGTTATCCGACATAAC
GACCATAACAGGAGCATCCT

Downstream 100 bases:

>100_bases
CCCTGCAAAATAGCCAATAATGGGAGAGCGGAGTCTCTCCCTTTTAATTTTTCCCTTCTAAAAGCAGTATGATGTCATAA
AGTTAAGTGAGAATAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHPDGSSMN
NDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ

Sequences:

>Translated_126_residues
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHPDGSSMN
NDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ
>Mature_126_residues
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHPDGSSMN
NDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786968, Length=126, Percent_Identity=99.2063492063492, Blast_Score=249, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020363
- ProDom:   PD079292 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12882; Mature: 12882

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDN
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NGVNTGSGGTMLHPDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTK
CCCCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDGTTQ
CCCCCC
>Mature Secondary Structure
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDN
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NGVNTGSGGTMLHPDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTK
CCCCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDGTTQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]