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The map label for this gene is ygfB [C]

Identifier: 209695957

GI number: 209695957

Start: 2720548

End: 2721117

Strand: Reverse

Name: ygfB [C]

Synonym: VSAL_I2539

Alternate gene names: 209695957

Gene position: 2721117-2720548 (Counterclockwise)

Preceding gene: 209695963

Following gene: 209695956

Centisome position: 81.83

GC content: 40.0

Gene sequence:

>570_bases
ATGAGCGAAATTAAAATGCCAGAATTCCTGACTGTAGAGTCAGCCCTTAAAGACAGTGGATTAGCGGTAACGCCCGCAGA
ATTACACGGCCTGCTAGTTGGTATGATAAGTGGTGGATTGCCTTTAGATGATAATGCATGGAAGCCTTTAATGTATGATT
ACACTAATGATGGGTTAGGATGGCCTGACAGTGCCATTCAGATCGGAAGTGCCGTTTTCCAATTTACCGTTGCAGAGTTA
ACGGGAAGCGAATTGGCTCTCTCAATGTTAATTCCCAATGATAAAGAAGGACTAATGAACCGAGCTGATGGACTAAGTGA
GTGGGTGAATCATTTTATTTCAGGACTTGGTTTAGTTGATCTGAAAATGGATAAAGCATCAGAAGCATTAAAAGAAGCTT
TAGTTGATCTAGAAGAAATTGCGCGTCTAGGGATCGACGAAGATGATGATATTGAAGAGCAAGAGAGTTTATTTGAACAA
GTGTTAGAACATGTGCATGTTTGTGTATTAACTATTCACTTAGAATTGGGTCAACGTATTCATAAAGATGCGTCTAAAGC
TGTCCACTAA

Upstream 100 bases:

>100_bases
AATATGATGAAAAGATACTCAATTGAAAGTGATCGTGAGTTTTCTGAATTTGCTTGAAGTGGTAGCATGGGGTACTAATC
ATAAATTTAGAGAGCTTCTA

Downstream 100 bases:

>100_bases
TGAGTGAAGATATGACACATTATGATGTTGTTATTGTTGGTGGAGCAATGGCTGGAGCTACTCTAGCGTTGGCACTACAA
CAAATGACCAAAGGTGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSEIKMPEFLTVESALKDSGLAVTPAELHGLLVGMISGGLPLDDNAWKPLMYDYTNDGLGWPDSAIQIGSAVFQFTVAEL
TGSELALSMLIPNDKEGLMNRADGLSEWVNHFISGLGLVDLKMDKASEALKEALVDLEEIARLGIDEDDDIEEQESLFEQ
VLEHVHVCVLTIHLELGQRIHKDASKAVH

Sequences:

>Translated_189_residues
MSEIKMPEFLTVESALKDSGLAVTPAELHGLLVGMISGGLPLDDNAWKPLMYDYTNDGLGWPDSAIQIGSAVFQFTVAEL
TGSELALSMLIPNDKEGLMNRADGLSEWVNHFISGLGLVDLKMDKASEALKEALVDLEEIARLGIDEDDDIEEQESLFEQ
VLEHVHVCVLTIHLELGQRIHKDASKAVH
>Mature_188_residues
SEIKMPEFLTVESALKDSGLAVTPAELHGLLVGMISGGLPLDDNAWKPLMYDYTNDGLGWPDSAIQIGSAVFQFTVAELT
GSELALSMLIPNDKEGLMNRADGLSEWVNHFISGLGLVDLKMDKASEALKEALVDLEEIARLGIDEDDDIEEQESLFEQV
LEHVHVCVLTIHLELGQRIHKDASKAVH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family

Homologues:

Organism=Escherichia coli, GI87082182, Length=170, Percent_Identity=38.8235294117647, Blast_Score=104, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2539_ALISL (B6EKP3)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002263887.1
- GeneID:   6989354
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I2539
- HOGENOM:   HBG701093
- OMA:   ELMNDGQ
- ProtClustDB:   PRK01736
- HAMAP:   MF_00346
- InterPro:   IPR011978
- TIGRFAMs:   TIGR02292

Pfam domain/function: PF03695 UPF0149; SSF101327 YgfB_YecA

EC number: NA

Molecular weight: Translated: 20694; Mature: 20563

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIKMPEFLTVESALKDSGLAVTPAELHGLLVGMISGGLPLDDNAWKPLMYDYTNDGLG
CCCCCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
WPDSAIQIGSAVFQFTVAELTGSELALSMLIPNDKEGLMNRADGLSEWVNHFISGLGLVD
CCHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHCHHHHHHHHHHHCCCEEE
LKMDKASEALKEALVDLEEIARLGIDEDDDIEEQESLFEQVLEHVHVCVLTIHLELGQRI
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKDASKAVH
HHHHHHCCC
>Mature Secondary Structure 
SEIKMPEFLTVESALKDSGLAVTPAELHGLLVGMISGGLPLDDNAWKPLMYDYTNDGLG
CCCCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
WPDSAIQIGSAVFQFTVAELTGSELALSMLIPNDKEGLMNRADGLSEWVNHFISGLGLVD
CCHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHCHHHHHHHHHHHCCCEEE
LKMDKASEALKEALVDLEEIARLGIDEDDDIEEQESLFEQVLEHVHVCVLTIHLELGQRI
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKDASKAVH
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA